Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3563

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3563: 11931 - Hypothetical Protein, at 61951 to 62967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63584 to 64390 11932

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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61,156 + 0.3
61,299 + 0.5
61,424 + 0.1
61,480 + 0.6
61,571 + 0.7
61,600 + 0.2
61,710 - -0.6
61,731 + 1.0
62,305 - 11931 mRNA_3563 0.35 0.5
62,307 - 11931 mRNA_3563 0.35 0.3
62,308 - 11931 mRNA_3563 0.35 0.3
62,309 + 11931 mRNA_3563 0.35 0.3
62,367 + 11931 mRNA_3563 0.41 -0.0
62,588 + 11931 mRNA_3563 0.63 0.8
62,601 + 11931 mRNA_3563 0.64 0.3
62,894 + 0.2
63,002 + -0.2
63,003 - -1.0
63,020 + 0.5
63,026 + 0.9
63,044 - 0.8
63,504 + 1.2
63,533 + 2.1
63,625 + 1.2
63,645 + -1.0
63,646 - -0.2
63,691 - 11932 mRNA_3564 0.13 0.3
63,696 + 11932 mRNA_3564 0.14 -0.2
63,696 + 11932 mRNA_3564 0.14 0.4
63,735 + 11932 mRNA_3564 0.19 0.1
63,744 + 11932 mRNA_3564 0.20 0.4
63,758 + 11932 mRNA_3564 0.22 1.0
63,758 - 11932 mRNA_3564 0.22 -0.2
63,778 - 11932 mRNA_3564 0.24 -0.0
63,780 - 11932 mRNA_3564 0.24 -1.2
63,795 + 11932 mRNA_3564 0.26 0.0
63,796 - 11932 mRNA_3564 0.26 0.2
63,809 - 11932 mRNA_3564 0.28 0.2
63,817 + 11932 mRNA_3564 0.29 0.6
63,826 + 11932 mRNA_3564 0.30 1.3
63,842 - 11932 mRNA_3564 0.32 1.3
63,850 + 11932 mRNA_3564 0.33 0.7
63,914 - 11932 mRNA_3564 0.41 1.2