Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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2 + -0.1
2 + -0.4
2 + 0.6
2 + 0.5
2 + 0.7
2 + 0.6
2 + 0.5
14 + 0.5
26 + 0.3
36 + -1.7
39 + 1.0
42 - -0.2
50 + 1.4
50 + 0.2
50 + 0.7
53 - 0.4
57 + -0.2
59 - -0.2
103 + 1.2
104 + 0.5
112 + 0.4
117 - 0.5
120 - -1.4
140 - 0.3
141 + 0.1
146 + 0.6
150 + 0.7
199 - 11905 mRNA_3537 0.12 -0.7
200 + 11905 mRNA_3537 0.12 0.0
200 - 11905 mRNA_3537 0.12 0.1
200 - 11905 mRNA_3537 0.12 -0.8
200 - 11905 mRNA_3537 0.12 0.8
201 - 11905 mRNA_3537 0.12 1.3
207 + 11905 mRNA_3537 0.13 0.1
207 + 11905 mRNA_3537 0.13 -0.7
207 + 11905 mRNA_3537 0.13 1.2
209 + 11905 mRNA_3537 0.13 0.7
210 + 11905 mRNA_3537 0.13 0.1
213 + 11905 mRNA_3537 0.14 1.2
213 + 11905 mRNA_3537 0.14 1.2
214 + 11905 mRNA_3537 0.14 0.5
214 + 11905 mRNA_3537 0.14 0.6
218 + 11905 mRNA_3537 0.14 0.3
221 + 11905 mRNA_3537 0.15 0.2
222 + 11905 mRNA_3537 0.15 -0.6
222 + 11905 mRNA_3537 0.15 0.4
222 + 11905 mRNA_3537 0.15 0.4
223 - 11905 mRNA_3537 0.15 0.4
225 - 11905 mRNA_3537 0.15 0.7
227 - 11905 mRNA_3537 0.15 0.5
227 + 11905 mRNA_3537 0.15 -0.5
230 + 11905 mRNA_3537 0.16 0.5
230 + 11905 mRNA_3537 0.16 0.6
246 - 11905 mRNA_3537 0.18 0.5
246 - 11905 mRNA_3537 0.18 0.7
251 + 11905 mRNA_3537 0.18 1.2
252 + 11905 mRNA_3537 0.18 0.9
260 + 11905 mRNA_3537 0.19 1.4
262 + 11905 mRNA_3537 0.20 -1.4
265 - 11905 mRNA_3537 0.20 -0.0
272 - 11905 mRNA_3537 0.21 0.3
274 + 11905 mRNA_3537 0.21 0.4
325 - 11905 mRNA_3537 0.27 -1.1
326 - 11905 mRNA_3537 0.27 0.3
341 + 11905 mRNA_3537 0.29 0.6
359 + 11905 mRNA_3537 0.31 1.4
362 + 11905 mRNA_3537 0.32 -0.0
367 - 11905 mRNA_3537 0.32 1.8
368 + 11905 mRNA_3537 0.33 0.0
368 + 11905 mRNA_3537 0.33 -0.2
368 + 11905 mRNA_3537 0.33 -1.2
373 + 11905 mRNA_3537 0.33 0.6
373 - 11905 mRNA_3537 0.33 0.6
373 - 11905 mRNA_3537 0.33 0.2
379 + 11905 mRNA_3537 0.34 0.6
380 + 11905 mRNA_3537 0.34 1.2
417 + 11905 mRNA_3537 0.39 0.1
452 + 11905 mRNA_3537 0.43 0.4
472 + 11905 mRNA_3537 0.45 1.6
484 + 11905 mRNA_3537 0.47 0.9
489 - 11905 mRNA_3537 0.47 -0.1
503 - 11905 mRNA_3537 0.49 -0.7
511 + 11905 mRNA_3537 0.50 0.4
518 + 11905 mRNA_3537 0.51 -1.0
523 + 11905 mRNA_3537 0.52 -0.4
533 + 11905 mRNA_3537 0.53 0.2
539 + 11905 mRNA_3537 0.54 1.0
550 + 11905 mRNA_3537 0.55 -0.1
579 + 11905 mRNA_3537 0.58 0.9
638 - 11905 mRNA_3537 0.66 2.6
640 - 11905 mRNA_3537 0.66 -0.8
657 + 11905 mRNA_3537 0.68 0.4
762 - 11905 mRNA_3537 0.81 0.2
768 + 11905 mRNA_3537 0.82 0.1
791 - 11905 mRNA_3537 0.84 0.5
801 + 11905 mRNA_3537 0.86 -0.5
804 + 11905 mRNA_3537 0.86 1.0
822 + 11905 mRNA_3537 0.88 -0.8
827 + 11905 mRNA_3537 0.89 0.3
842 + 0.0
842 + 0.2
845 - -0.1
962 - 2.2
990 + -2.3
1,074 + -0.7
1,080 - -0.1
1,107 + 1.9
1,110 - 1.8
1,123 + 0.9
1,143 + 0.1
1,256 - -0.0
1,278 + 0.1
1,336 + 0.3
1,371 - -0.4
1,404 - 0.7
1,429 + 0.1
1,450 + 0.8
1,528 + 1.1
1,550 + 0.5
1,647 - 0.1
1,653 + -0.3
1,661 - -2.1
1,663 + 0.5
1,719 + 0.3
1,720 + 0.8
1,760 + -0.9
1,814 - -1.8
1,902 - 1.0