Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3536

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3535: 11903 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 331726 to 332711 11903 mRNA_3536: 11904 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 333294 to 333991 11904

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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332,759 - -0.4
332,845 - 0.6
332,881 - 0.3
332,963 + -0.2
332,977 - 0.3
333,135 + 0.6
333,427 - 11904 mRNA_3536 0.19 -0.3
333,569 + 11904 mRNA_3536 0.39 0.1
333,580 - 11904 mRNA_3536 0.41 -0.2
333,683 - 11904 mRNA_3536 0.56 3.1
333,706 - 11904 mRNA_3536 0.59 0.7
333,715 - 11904 mRNA_3536 0.60 0.5
333,716 - 11904 mRNA_3536 0.60 -0.1
333,736 - 11904 mRNA_3536 0.63 0.7