Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3477

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3476: 11844 - K01915 glnA, GLUL glutamine synthetase, at 198470 to 200585 11844 mRNA_3477: 11845 - K07088 K07088 uncharacterized protein, at 201579 to 204327 11845 mRNA_3478: 11846 - SUPERFAMILY--SSF56112, at 204722 to 206830 11846

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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200,624 + -0.6
200,627 - 0.1
200,630 + 0.6
200,631 - -0.2
200,637 + -0.2
200,648 - 0.3
200,648 + 0.4
200,650 + -0.2
200,702 - -0.4
200,703 + 0.4
200,705 - 0.7
200,707 - 0.6
200,707 - 0.8
200,709 + 1.3
200,709 - 0.9
200,717 - 0.9
200,727 + 1.7
200,734 - 0.1
200,739 - 0.5
200,779 + -0.3
200,846 - -0.6
200,847 - -0.9
200,865 - -0.0
200,868 + 0.4
200,871 + 0.3
200,874 + -1.0
200,882 + 0.2
200,890 - 0.1
201,008 + -0.2
201,022 + 0.9
201,026 + 0.0
201,032 - -0.2
201,177 - -0.8
201,178 + 0.2
201,208 + 0.2
201,429 - -0.3
201,432 + 1.0
201,602 + -0.1
201,884 - 11845 mRNA_3477 0.11 0.5
202,630 + 11845 mRNA_3477 0.38 -0.2
203,158 + 11845 mRNA_3477 0.57 0.1
203,850 + 11845 mRNA_3477 0.83 0.9
204,086 + -0.4
204,093 + 0.7
204,275 - -1.0
204,292 + -0.4
204,411 - -0.1
204,562 + -0.3
204,863 - 0.8