Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3460

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3459: 11827 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 147794 to 151467 11827 mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151624 to 153827 11828 mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154218 to 156143 11829

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
150,641 - 11827 mRNA_3459 0.77 -0.2
150,671 - 11827 mRNA_3459 0.78 0.0
150,794 - 11827 mRNA_3459 0.82 0.2
150,834 - 11827 mRNA_3459 0.83 -0.2
150,913 - 11827 mRNA_3459 0.85 1.4
150,916 + 11827 mRNA_3459 0.85 0.9
150,943 + 11827 mRNA_3459 0.86 0.9
151,047 + 11827 mRNA_3459 0.89 0.3
151,093 - 11827 mRNA_3459 0.90 -0.3
151,172 + 0.4
151,281 - 0.7
151,391 - 0.6
151,395 - 0.4
151,397 - -0.0
151,403 - -0.8
151,411 - 0.5
151,434 + 1.8
151,520 + 1.2
151,525 + -0.1
151,529 + 0.0
151,559 + 0.1
151,564 + 0.9
151,568 + -0.2
151,570 + 0.8
151,574 + 1.0
151,710 + 0.1
151,714 - 0.3
151,866 + 11828 mRNA_3460 0.11 0.3
152,018 - 11828 mRNA_3460 0.18 -0.2
152,362 - 11828 mRNA_3460 0.33 0.6
152,510 + 11828 mRNA_3460 0.40 -0.3
152,866 - 11828 mRNA_3460 0.56 0.8
153,141 - 11828 mRNA_3460 0.69 0.5
153,141 - 11828 mRNA_3460 0.69 0.6
153,147 + 11828 mRNA_3460 0.69 0.1
153,204 - 11828 mRNA_3460 0.72 -0.1
153,331 - 11828 mRNA_3460 0.77 -0.1
153,332 + 11828 mRNA_3460 0.77 2.0
153,334 + 11828 mRNA_3460 0.78 0.2
153,344 - 11828 mRNA_3460 0.78 0.9
153,345 - 11828 mRNA_3460 0.78 0.6
153,477 + 11828 mRNA_3460 0.84 2.5
153,517 + 11828 mRNA_3460 0.86 0.2
153,525 + 11828 mRNA_3460 0.86 1.6
153,646 + -0.0
153,753 - -0.1
153,775 - 1.1
153,793 - -0.3
153,801 - 0.2
153,808 - 2.3
153,909 - -0.4
153,916 + 0.2
153,939 - 0.7
154,078 + 0.8
154,215 + 0.1
154,351 - -1.0
154,369 - -0.2
154,376 + 0.7