Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3437

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94407 to 97285 11804 mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97433 to 99630 11805 mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99777 to 103344 11806

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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96,495 - 11804 mRNA_3436 0.73 0.4
96,623 - 11804 mRNA_3436 0.77 -0.3
96,894 - 11804 mRNA_3436 0.86 0.7
96,915 - 11804 mRNA_3436 0.87 0.9
96,930 + 11804 mRNA_3436 0.88 0.0
97,002 - 1.0
97,080 - 0.4
97,204 + 0.0
97,358 + 0.1
97,388 + 0.7
97,412 - 0.3
99,393 + 11805 mRNA_3437 0.89 0.3
99,712 - 0.8
99,851 + 0.4
100,033 - 0.9
100,201 + 11806 mRNA_3438 0.12 -0.2
100,203 - 11806 mRNA_3438 0.12 1.0