Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3378

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3377: 11745 - KOG1516 Carboxylesterase and related proteins, at 531386 to 533428 11745 mRNA_3378: 11746 - KOG1516 Carboxylesterase and related proteins, at 533955 to 535983 11746

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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533,086 + 11745 mRNA_3377 0.83 0.9
533,088 - 11745 mRNA_3377 0.83 0.9
533,089 + 11745 mRNA_3377 0.83 -0.1
533,308 - 0.5
533,453 - -0.2
533,453 - -0.0
533,524 - -0.9
533,608 - -0.5
533,990 + -0.1
534,033 - 0.3
534,080 - -0.3
534,399 - 11746 mRNA_3378 0.22 0.4
534,442 + 11746 mRNA_3378 0.24 0.3
534,647 + 11746 mRNA_3378 0.34 0.3
534,674 - 11746 mRNA_3378 0.35 0.6
534,689 - 11746 mRNA_3378 0.36 0.4
534,847 + 11746 mRNA_3378 0.44 -0.8
534,966 - 11746 mRNA_3378 0.50 0.7
534,990 - 11746 mRNA_3378 0.51 1.5
535,187 + 11746 mRNA_3378 0.61 0.7
535,463 - 11746 mRNA_3378 0.74 0.5
535,911 + -0.5
536,061 + -0.2
536,183 - 1.2
536,186 - 0.4
536,194 - 0.1
536,195 - 1.0
536,349 - 0.4
536,504 - 1.6
536,506 + 1.3
536,535 - 1.5
536,536 + 0.6
536,613 - 0.6
536,815 + 0.8
536,819 + 0.1
536,950 - 0.0
536,975 + -0.6