Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3368

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3367: 11735 - Hypothetical Protein, at 506446 to 507688 11735 mRNA_3368: 11736 - Hypothetical Protein, at 508534 to 511308 11736 mRNA_3369: 11737 - KOG2659 LisH motif-containing protein, at 511919 to 513281 11737

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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507,585 + 0.0
507,801 - 1.0
507,932 + 1.5
508,217 - 0.4
508,221 + 0.3
508,388 + 0.8
508,971 + 11736 mRNA_3368 0.16 0.4
509,528 + 11736 mRNA_3368 0.36 0.5
509,739 + 11736 mRNA_3368 0.43 1.4
509,933 - 11736 mRNA_3368 0.50 0.9
510,821 - 11736 mRNA_3368 0.82 0.2
510,988 - 11736 mRNA_3368 0.88 -0.1
511,063 - 0.2
511,071 + 0.2
511,156 + 1.3
511,260 - 0.8
511,277 - -0.8
511,298 - 1.1
511,299 - 0.1
511,303 - 0.6
511,312 + 0.0
511,320 + -0.0
511,328 + 0.5
511,340 - 1.4
511,385 + 0.4
511,400 - -0.4
511,414 - -0.7
511,429 - 0.3
511,429 - 1.0
511,454 + -0.3
511,459 + -0.1
511,477 + 0.2
511,563 + -0.5
511,604 + 0.3
511,634 + 0.0
511,644 - 1.0
511,739 - 0.5
511,782 + -0.6
511,796 - 1.7
511,885 + 0.4
511,933 - 1.7
512,243 - 11737 mRNA_3369 0.24 1.1