Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3318

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3317: 11685 - SUPERFAMILY--SSF52540, at 381412 to 382785 11685 mRNA_3318: 11686 - K14640 SLC20A, PIT solute carrier family 20 (sodium-dependent phosphate transporter), at 383705 to 386213 11686 mRNA_3319: 11687 - KOG3854 SPRT-like metalloprotease, at 386428 to 389154 11687

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
382,739 - 1.0
383,029 + 0.1
383,161 - 1.6
383,190 + 0.1
383,311 - -0.1
383,460 - 1.4
383,467 + -0.6
383,471 - 0.5
383,471 + 0.1
383,476 - 0.2
383,483 + -0.0
383,484 - -0.2
383,487 - 0.3
383,490 + -0.0
383,498 + -0.6
383,510 - -0.2
383,522 + -0.2
383,574 + 0.2
383,672 + -0.1
383,679 + 0.5
383,688 - 0.0
383,701 - 1.1
383,743 + 0.5
383,778 + 0.7
383,815 - 0.5
383,836 + 0.3
383,972 - 11686 mRNA_3318 0.11 -0.7
383,998 - 11686 mRNA_3318 0.12 0.5
384,166 + 11686 mRNA_3318 0.18 1.5
384,410 - 11686 mRNA_3318 0.28 0.1
384,739 + 11686 mRNA_3318 0.41 2.0
385,136 + 11686 mRNA_3318 0.57 -0.0
385,153 - 11686 mRNA_3318 0.58 0.9
385,291 + 11686 mRNA_3318 0.63 3.0
385,341 + 11686 mRNA_3318 0.65 0.1
385,545 - 11686 mRNA_3318 0.73 -0.1
385,615 + 11686 mRNA_3318 0.76 -0.5
385,755 + 11686 mRNA_3318 0.82 -1.0
385,932 - 11686 mRNA_3318 0.89 0.2
385,997 + 0.0
386,084 + 0.2
386,446 + 0.2
386,461 + 1.0
386,477 - 1.5
387,070 + 11687 mRNA_3319 0.24 0.5
387,091 + 11687 mRNA_3319 0.24 -0.5
387,183 - 11687 mRNA_3319 0.28 1.2
387,186 + 11687 mRNA_3319 0.28 -0.1