Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3299

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3298: 11666 - Hypothetical Protein, at 329367 to 333104 11666 mRNA_3299: 11667 - K19704 PTC1 protein phosphatase PTC1, at 333758 to 335633 11667 mRNA_3300: 11668 - HMMPfam-Amidohydrolase-PF13147,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 335794 to 339454 11668

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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332,945 + 0.0
333,119 + 0.1
333,290 + -0.1
333,294 + 0.1
333,298 + 0.1
333,309 - -0.9
333,392 - 0.2
333,399 + -0.5
333,591 + 0.0
333,875 + 0.3
333,998 + 11667 mRNA_3299 0.13 -0.5
334,161 - 11667 mRNA_3299 0.21 0.2
334,161 + 11667 mRNA_3299 0.21 0.2
334,300 + 11667 mRNA_3299 0.29 0.5
334,844 - 11667 mRNA_3299 0.58 0.3
334,844 + 11667 mRNA_3299 0.58 1.2
334,894 + 11667 mRNA_3299 0.61 0.2
335,164 - 11667 mRNA_3299 0.75 -0.1
335,184 - 11667 mRNA_3299 0.76 -0.0
335,440 + 11667 mRNA_3299 0.90 0.0
335,458 - 0.1
335,463 - -2.2
335,607 + 0.1
335,660 - 0.8
335,759 + 2.1
335,775 + 0.7
335,923 - 0.1
335,929 - 0.6
336,044 + 0.3
336,359 + 11668 mRNA_3300 0.15 0.4
336,359 - 11668 mRNA_3300 0.15 0.1