Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3263

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3262: 11630 - SUPERFAMILY--SSF47616, at 239833 to 240831 11630 mRNA_3263: 11631 - BLAST Receptor-activated Ca2+-permeable cation channel [Rho..., at 240935 to 243648 11631 mRNA_3264: 11632 - K08495 GOSR1, GOS1 golgi SNAP receptor complex member 1, at 243913 to 244924 11632

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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240,055 - 11630 mRNA_3262 0.22 1.1
240,981 - 0.2
241,064 + 0.7
241,230 - 11631 mRNA_3263 0.11 -1.2
241,673 + 11631 mRNA_3263 0.27 0.2
241,675 + 11631 mRNA_3263 0.27 0.3
241,701 + 11631 mRNA_3263 0.28 -0.0
241,822 - 11631 mRNA_3263 0.33 0.4
241,986 - 11631 mRNA_3263 0.39 -0.5
242,129 - 11631 mRNA_3263 0.44 0.1
242,255 - 11631 mRNA_3263 0.49 0.3
242,287 + 11631 mRNA_3263 0.50 1.1
242,552 + 11631 mRNA_3263 0.60 0.5
242,556 - 11631 mRNA_3263 0.60 1.5
242,698 - 11631 mRNA_3263 0.65 0.2
242,720 + 11631 mRNA_3263 0.66 1.1
242,846 - 11631 mRNA_3263 0.70 0.8
242,994 + 11631 mRNA_3263 0.76 0.1
242,999 - 11631 mRNA_3263 0.76 0.8
243,028 + 11631 mRNA_3263 0.77 -0.1
243,030 + 11631 mRNA_3263 0.77 0.5
243,584 + 0.3
243,584 + 1.5
243,757 + -1.0
243,865 - 1.2