Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3246

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3246: 11614 - Hypothetical Protein, at 205429 to 207188 11614 mRNA_3247: 11615 - Hypothetical Protein, at 207586 to 209247 11615

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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204,437 - -0.4
204,443 - 1.0
204,445 + -0.5
204,447 - -0.0
204,448 + 1.1
204,448 - 0.5
204,454 + -0.2
204,454 + 0.4
204,455 - 0.3
204,463 + -0.3
204,468 - 0.2
204,473 + 2.9
204,479 + 2.7
204,484 - 1.2
204,491 - 0.1
204,511 - 0.4
204,528 - 0.4
204,534 - 0.5
204,547 - 0.3
204,557 + -0.2
204,639 + 1.1
204,647 + -0.7
204,652 - -0.3
204,654 + -0.3
204,664 - -0.1
204,665 + 0.6
204,678 + 1.3
204,695 + -1.8
204,699 + 0.6
204,724 - -0.3
204,727 + 0.2
204,801 - 0.2
204,811 + 1.0
204,826 + 1.4
204,957 - 2.5
205,112 + 0.3
205,123 + -1.4
205,258 + -0.8
205,351 + -0.8
205,379 - -0.4
205,534 + -0.2
205,548 - 0.3
205,821 + 11614 mRNA_3246 0.22 -0.2
205,842 - 11614 mRNA_3246 0.23 -0.7
205,853 + 11614 mRNA_3246 0.24 0.1
206,075 + 11614 mRNA_3246 0.37 0.0
206,250 - 11614 mRNA_3246 0.47 0.6
206,282 + 11614 mRNA_3246 0.48 -1.3
206,716 - 11614 mRNA_3246 0.73 0.9
206,970 - 11614 mRNA_3246 0.88 0.4
206,989 + 11614 mRNA_3246 0.89 0.7
207,159 - 1.3
207,285 - 0.1
207,317 + 1.6
207,327 - -0.4
207,356 + -0.4
207,427 - 1.4
207,605 - 1.2
207,618 - 2.3
207,634 + -0.6
207,730 + 0.0
207,734 + 0.0
207,865 - 11615 mRNA_3247 0.17 0.5
207,926 - 11615 mRNA_3247 0.20 0.1
207,984 + 11615 mRNA_3247 0.24 0.0
208,012 + 11615 mRNA_3247 0.26 0.4