Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3240

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3240: 11608 - Hypothetical Protein, at 191163 to 192030 11608 mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192497 to 194768 11609

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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190,236 - 0.3
190,244 + 0.2
190,248 - 0.6
190,265 + 0.6
190,433 - 0.4
190,548 - -1.0
190,596 + 0.6
190,980 - 0.2
190,995 - -1.4
191,020 - 0.7
191,105 + 0.1
191,107 + 0.4
191,426 - 11608 mRNA_3240 0.30 -0.3
191,465 - 11608 mRNA_3240 0.35 0.8
191,674 + 11608 mRNA_3240 0.59 0.5
191,677 + 11608 mRNA_3240 0.59 -0.3
191,714 + 11608 mRNA_3240 0.63 0.5
191,861 + 11608 mRNA_3240 0.80 0.5
192,038 + -0.7
192,263 + -0.9
192,318 - 1.2
192,446 - -0.2
192,455 - -1.6
192,472 + 0.3
192,723 + -1.1
192,903 - 11609 mRNA_3241 0.18 0.2