Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3218

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3218: 11586 - PRINTS-Proline rich extensin signature-PR01217, at 118796 to 120170 11586

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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117,804 - 0.2
118,254 - 1.4
118,273 - 0.1
118,278 - -0.0
118,298 + -0.8
118,299 - -0.1
118,438 + 0.2
118,443 + 1.1
118,448 + 1.8
118,450 + -0.1
118,453 + 0.1
118,584 + -0.1
118,630 - -0.4
118,637 + 0.8
118,796 + -0.3
118,815 - 1.2
118,829 - 0.6
118,848 - 1.4
118,856 - 0.4
118,857 - 0.6
118,863 - -0.4
118,871 + 1.3
118,888 + 0.2
118,890 + 0.7
118,891 - 0.1
118,914 + 0.7
118,925 + 0.8
118,926 - -0.1
118,926 - 0.4
118,930 - 0.8
118,935 - 11586 mRNA_3218 0.10 0.3
118,936 + 11586 mRNA_3218 0.10 0.6
118,936 - 11586 mRNA_3218 0.10 0.3
118,943 - 11586 mRNA_3218 0.11 0.3
118,959 + 11586 mRNA_3218 0.12 0.5
119,003 + 11586 mRNA_3218 0.15 1.1
119,080 - 11586 mRNA_3218 0.21 0.5
119,109 - 11586 mRNA_3218 0.23 -0.6
119,407 - 11586 mRNA_3218 0.44 -0.1
119,449 - 11586 mRNA_3218 0.47 0.7
119,459 + 11586 mRNA_3218 0.48 0.5
119,478 - 11586 mRNA_3218 0.50 -1.2
119,556 - 11586 mRNA_3218 0.55 0.1
119,558 - 11586 mRNA_3218 0.55 0.2
119,572 + 11586 mRNA_3218 0.56 -0.4
119,575 - 11586 mRNA_3218 0.57 1.3
119,599 - 11586 mRNA_3218 0.58 -0.6
119,718 - 11586 mRNA_3218 0.67 2.0
119,756 + 11586 mRNA_3218 0.70 -1.1
119,922 - 11586 mRNA_3218 0.82 1.3
120,048 - 0.2
120,145 - 1.1
120,232 - -0.2
120,921 - 1.8