Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3216

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3215: 11583 - K17103 CHO1, pssA CDP-diacylglycerol---serine O-phosphatidyltransferase, at 110757 to 112157 11583 mRNA_3216: 11584 - K12881 THOC4, ALY THO complex subunit 4, at 112618 to 114116 11584

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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112,251 - 1.2
112,374 + 0.4
112,390 + 1.5
112,539 - 0.3
112,543 - 1.1
112,812 - 11584 mRNA_3216 0.13 -0.7
112,834 - 11584 mRNA_3216 0.14 2.3
112,850 - 11584 mRNA_3216 0.15 0.6
113,424 + 11584 mRNA_3216 0.54 0.9
113,556 + 11584 mRNA_3216 0.63 0.2
114,323 - 1.7
114,448 + -0.1
114,561 + 0.9
114,574 + -0.7
114,759 - -0.1
114,759 - 0.3
114,929 - -0.2
114,932 + 2.4
114,938 + 0.1
114,987 + -0.2
115,069 - -0.3
115,071 - -0.7
115,072 + 0.6
115,086 + 1.0
115,088 + -0.3
115,096 + 1.7
115,101 - 1.0
115,102 + 0.7
115,103 - 1.0