Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3195

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3195: 11563 - Hypothetical Protein, at 60623 to 61680 11563 mRNA_3196: 11564 - Hypothetical Protein, at 62107 to 63896 11564

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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59,623 - 0.4
59,624 - -2.0
59,743 + -0.4
59,871 - -0.4
60,061 + -0.9
60,068 - 0.2
60,230 - 0.5
60,257 + -0.4
60,492 + 1.5
60,892 + 11563 mRNA_3195 0.25 0.4
60,896 + 11563 mRNA_3195 0.26 0.3
61,079 - 11563 mRNA_3195 0.43 1.5
61,088 + 11563 mRNA_3195 0.44 -0.2
61,100 - 11563 mRNA_3195 0.45 0.0
61,206 + 11563 mRNA_3195 0.55 1.6
61,392 - 11563 mRNA_3195 0.73 0.5
61,512 - 11563 mRNA_3195 0.84 1.0
61,627 + 0.3
61,676 + -0.1
61,684 + 0.7
61,707 + 0.6
61,710 - -0.3
61,786 - 0.1
61,796 + 2.1
61,796 - 0.2
61,807 + -0.0
61,825 + 0.6
61,835 - 1.2
61,932 - 1.0
61,958 + -0.0
62,347 - 11564 mRNA_3196 0.13 0.1
62,404 - 11564 mRNA_3196 0.17 0.0
62,497 - 11564 mRNA_3196 0.22 -0.0
62,505 + 11564 mRNA_3196 0.22 0.6
62,597 + 11564 mRNA_3196 0.27 0.6