Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3098

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3097: 11465 - K00591 COQ3 polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase, at 311599 to 312739 11465 mRNA_3098: 11466 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 312938 to 315396 11466 mRNA_3099: 11467 - Hypothetical Protein, at 315457 to 316238 11467

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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312,026 - 11465 mRNA_3097 0.37 0.6
312,032 + 11465 mRNA_3097 0.38 1.2
312,136 + 11465 mRNA_3097 0.47 -0.1
312,233 + 11465 mRNA_3097 0.56 -1.6
312,462 + 11465 mRNA_3097 0.76 -0.1
312,462 + 11465 mRNA_3097 0.76 -0.0
312,469 + 11465 mRNA_3097 0.76 -0.2
312,472 - 11465 mRNA_3097 0.77 -0.0
312,597 - 11465 mRNA_3097 0.87 -0.2
312,803 + -1.1
312,910 + 0.3
312,913 + -0.0
312,935 + 0.2
312,980 - -0.1
313,058 + -0.4
313,212 - 11466 mRNA_3098 0.11 -0.0
313,214 + 11466 mRNA_3098 0.11 0.2
313,337 + 11466 mRNA_3098 0.16 0.2
313,452 + 11466 mRNA_3098 0.21 0.0
313,466 + 11466 mRNA_3098 0.21 0.5
313,491 + 11466 mRNA_3098 0.22 -0.6
313,680 + 11466 mRNA_3098 0.30 -0.8
313,780 - 11466 mRNA_3098 0.34 -0.0
314,080 + 11466 mRNA_3098 0.46 -0.8
314,165 - 11466 mRNA_3098 0.50 -0.4
314,190 - 11466 mRNA_3098 0.51 -0.6
314,203 + 11466 mRNA_3098 0.51 0.1
314,324 - 11466 mRNA_3098 0.56 -0.2
314,347 + 11466 mRNA_3098 0.57 0.4
314,361 - 11466 mRNA_3098 0.58 -0.2
314,372 - 11466 mRNA_3098 0.58 0.3
314,400 + 11466 mRNA_3098 0.59 0.4
314,496 + 11466 mRNA_3098 0.63 1.2
314,510 + 11466 mRNA_3098 0.64 0.2
314,655 - 11466 mRNA_3098 0.70 1.1
314,854 + 11466 mRNA_3098 0.78 0.4
314,886 + 11466 mRNA_3098 0.79 -0.6
314,952 + 11466 mRNA_3098 0.82 -0.2
315,276 - -0.0
315,441 - -0.2
315,450 + 0.6
315,500 - 1.2
315,704 + 11467 mRNA_3099 0.32 0.6
315,716 - 11467 mRNA_3099 0.33 1.2
315,721 - 11467 mRNA_3099 0.34 0.0
315,728 + 11467 mRNA_3099 0.35 0.3
316,014 + 11467 mRNA_3099 0.71 2.0
316,303 - 0.0