Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3066

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3065: 11433 - Hypothetical Protein, at 230805 to 232101 11433 mRNA_3066: 11434 - K13449 PR1 pathogenesis-related protein 1, at 232396 to 233465 11434

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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231,459 - 11433 mRNA_3065 0.50 0.1
231,461 - 11433 mRNA_3065 0.51 -0.1
231,465 - 11433 mRNA_3065 0.51 0.5
231,467 + 11433 mRNA_3065 0.51 0.5
231,468 + 11433 mRNA_3065 0.51 -0.4
231,489 + 11433 mRNA_3065 0.53 0.3
231,592 + 11433 mRNA_3065 0.61 -0.3
231,632 + 11433 mRNA_3065 0.64 -0.6
231,752 + 11433 mRNA_3065 0.73 0.1
231,758 + 11433 mRNA_3065 0.73 -0.3
231,764 + 11433 mRNA_3065 0.74 0.0
231,771 + 11433 mRNA_3065 0.74 0.4
231,778 - 11433 mRNA_3065 0.75 0.2
231,780 - 11433 mRNA_3065 0.75 0.4
231,783 + 11433 mRNA_3065 0.75 -0.3
231,911 - 11433 mRNA_3065 0.85 0.1
231,924 + 11433 mRNA_3065 0.86 0.5
231,927 + 11433 mRNA_3065 0.87 -0.1
231,948 + 11433 mRNA_3065 0.88 0.5
232,071 - 0.1
232,072 - 1.7
232,086 + 1.6
232,178 - 0.4
232,205 - -0.3
232,227 - 0.6
232,384 - 0.7
232,516 - 11434 mRNA_3066 0.11 -1.1
232,656 + 11434 mRNA_3066 0.24 0.2
232,659 - 11434 mRNA_3066 0.25 0.3
232,951 - 11434 mRNA_3066 0.52 1.0
232,952 - 11434 mRNA_3066 0.52 0.6
233,123 - 11434 mRNA_3066 0.68 -1.7
233,207 - 11434 mRNA_3066 0.76 0.5
233,430 + 0.5
233,546 - 0.8
233,573 - 0.3
233,713 + -0.1
233,788 - 2.0
233,817 + 1.2
233,827 + 0.2
233,828 - 0.1
233,829 - 1.5
233,837 + 0.8
233,844 + 1.3
233,853 - -0.3
233,854 + -0.0
233,865 - 1.0
233,865 - 1.5
233,899 + -0.3
233,937 - 0.9
233,940 - 1.3
233,943 + 0.7
233,947 - 1.1
233,948 - 0.7
233,949 - 0.0
233,951 - 1.7
233,952 - -0.1
233,956 - 0.8
233,957 + 0.8
233,966 - 0.5
233,968 - -0.3
233,968 - 0.2
233,969 - -0.7
233,971 + -0.3
233,971 + 0.3
233,972 - -0.2
233,979 - -0.3
233,986 + -0.2
234,005 - 0.7
234,010 + 0.2
234,013 + 0.5
234,018 - 0.1
234,021 + 0.5
234,024 - 0.2
234,035 - 1.1
234,069 - -0.6
234,069 - 0.6
234,080 - -0.7
234,082 - 1.2
234,086 - 0.6
234,095 - -0.3
234,097 - 1.0
234,109 + 1.1
234,109 - 0.9
234,118 - 0.0
234,121 + 0.5
234,126 - 0.6
234,132 - 0.7
234,148 - 0.3
234,157 + 0.0
234,250 - 0.3
234,271 - 0.9
234,314 + 0.6
234,413 - 0.4
234,424 - -0.0
234,453 - 0.1
234,455 - 0.3