Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3059

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3059: 11427 - Hypothetical Protein, at 217589 to 219191 11427 mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219691 to 221317 11428

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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216,674 + -0.0
216,742 + 0.3
216,837 - 2.2
216,865 - 0.1
216,868 - 0.0
216,879 + 0.1
216,882 + 0.8
216,884 - -0.4
217,004 + 0.8
217,009 - 0.8
217,011 - 0.6
217,029 - 0.1
217,032 + 1.2
217,035 - -0.8
217,037 + 0.4
217,038 + -0.1
217,045 - 0.6
217,152 - 1.7
217,173 + 0.3
217,193 + 0.9
217,252 - 0.4
217,317 + 1.5
217,461 - 0.9
217,464 + 0.1
217,470 - -0.1
217,470 - 0.4
217,475 + -0.0
217,636 + 0.9
217,909 + 11427 mRNA_3059 0.20 -0.2
217,927 - 11427 mRNA_3059 0.21 0.0
218,062 + 11427 mRNA_3059 0.30 -0.0
218,066 + 11427 mRNA_3059 0.30 0.6
218,147 - 11427 mRNA_3059 0.35 -1.2
218,168 + 11427 mRNA_3059 0.36 1.0
218,203 - 11427 mRNA_3059 0.38 0.7
218,447 - 11427 mRNA_3059 0.54 0.6
218,618 + 11427 mRNA_3059 0.64 -0.9
218,635 - 11427 mRNA_3059 0.65 -0.0
218,649 + 11427 mRNA_3059 0.66 0.3
218,747 + 11427 mRNA_3059 0.72 0.6
218,798 - 11427 mRNA_3059 0.75 -0.7
218,892 - 11427 mRNA_3059 0.81 -1.3
218,996 + 11427 mRNA_3059 0.88 -0.5
219,037 + 0.2
219,182 - 0.1
219,183 - -0.3
219,309 - 0.3
219,330 - -0.4
219,331 - -0.1
219,346 - 0.6
219,346 - -1.0
219,347 + 1.4
219,451 - -0.0
219,453 + 1.1
219,467 - 1.1
219,484 - -0.3
219,501 - 0.2
219,513 + -2.1
219,624 - -0.3
219,630 + 0.2
219,630 + 0.3
219,637 + 1.0
219,639 + -0.2
219,753 - 0.4
219,759 - 0.0
219,763 + -0.1
219,765 - -0.1
219,768 - 0.7
219,773 + 0.3
219,780 - 0.5
219,902 - 11428 mRNA_3060 0.13 0.2
219,902 - 11428 mRNA_3060 0.13 1.2
219,903 + 11428 mRNA_3060 0.13 0.3
219,908 + 11428 mRNA_3060 0.13 -1.2
219,931 + 11428 mRNA_3060 0.15 0.4
220,038 - 11428 mRNA_3060 0.21 0.7
220,082 + 11428 mRNA_3060 0.24 0.4