Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3038

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3037: 11405 - Hypothetical Protein, at 156746 to 157530 11405 mRNA_3038: 11406 - K19327 ANO10, TMEM16K anoctamin-10, at 157632 to 160610 11406

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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156,660 + 0.9
156,939 + 11405 mRNA_3037 0.25 1.1
156,991 - 11405 mRNA_3037 0.31 0.6
157,091 - 11405 mRNA_3037 0.44 1.4
157,093 - 11405 mRNA_3037 0.44 -0.0
157,104 - 11405 mRNA_3037 0.46 1.0
157,205 - 11405 mRNA_3037 0.58 0.1
157,242 - 11405 mRNA_3037 0.63 -0.5
157,246 + 11405 mRNA_3037 0.64 -0.5
157,301 + 11405 mRNA_3037 0.71 0.8
157,414 + 11405 mRNA_3037 0.85 1.6
157,419 - 11405 mRNA_3037 0.86 0.9
157,422 + 11405 mRNA_3037 0.86 0.4
157,571 + 0.3
157,611 + 0.7
158,002 + 11406 mRNA_3038 0.12 -0.3
158,039 - 11406 mRNA_3038 0.14 0.2
158,291 + 11406 mRNA_3038 0.22 -0.3
158,584 + 11406 mRNA_3038 0.32 0.7
158,599 - 11406 mRNA_3038 0.32 0.5
158,773 - 11406 mRNA_3038 0.38 0.5
159,019 - 11406 mRNA_3038 0.47 -0.8
159,125 - 11406 mRNA_3038 0.50 0.5
159,320 + 11406 mRNA_3038 0.57 1.0
159,463 - 11406 mRNA_3038 0.61 0.2
159,612 - 11406 mRNA_3038 0.66 0.8
160,183 - 11406 mRNA_3038 0.86 -0.2
160,188 + 11406 mRNA_3038 0.86 0.2
160,372 + -1.4
160,402 - 0.5
160,433 + 0.7
160,472 + 0.6
160,481 + 0.3
160,482 - 1.5
160,492 + 0.1
160,503 + -0.1
160,510 + -0.5
160,511 - 0.5
160,512 + -0.0
160,514 + -1.2
160,516 + 0.7
160,623 + 1.2
160,650 + -0.2
160,651 + -0.9
160,663 - 0.1
160,665 + 0.1
160,777 - 1.1
160,808 + -1.6
160,825 - 0.9
160,911 - 0.1
160,941 - 0.9
160,946 + -0.1
160,952 - -0.0
160,962 + 0.6
160,968 + -0.1
160,979 - 0.2
160,980 + 0.1
160,982 - 0.9
160,982 + -0.1
160,983 - 0.3
160,983 - 0.4
160,983 + -0.3
160,985 - 1.9
160,986 - 0.2
160,995 - 0.2
161,001 + 0.0
161,048 - 0.1
161,178 - 1.7
161,180 + -0.3
161,184 - -0.7
161,185 + 0.2
161,185 - 0.2
161,190 + 0.3
161,191 - -0.0
161,192 - 1.1
161,192 + 1.1
161,209 - 0.7
161,212 + -0.5
161,224 - -0.1
161,233 + 1.0
161,254 + 1.3
161,369 + 0.3
161,530 + 0.5
161,555 + 0.2