Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3010

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3009: 11377 - Hypothetical Protein, at 65747 to 66498 11377 mRNA_3010: 11378 - K10398 KIF11, EG5 kinesin family member 11, at 66880 to 69062 11378

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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65,912 - 11377 mRNA_3009 0.22 -0.5
65,913 + 11377 mRNA_3009 0.22 -0.1
65,914 + 11377 mRNA_3009 0.22 0.4
65,918 + 11377 mRNA_3009 0.23 1.9
65,939 - 11377 mRNA_3009 0.26 -0.3
65,941 + 11377 mRNA_3009 0.26 0.4
66,007 + 11377 mRNA_3009 0.35 1.9
66,015 - 11377 mRNA_3009 0.36 -0.6
66,018 + 11377 mRNA_3009 0.36 1.1
66,033 + 11377 mRNA_3009 0.38 0.8
66,052 - 11377 mRNA_3009 0.41 0.7
66,073 - 11377 mRNA_3009 0.43 0.3
66,077 - 11377 mRNA_3009 0.44 0.3
66,335 - 11377 mRNA_3009 0.78 0.3
66,651 - 1.4
66,782 - 0.5
66,813 + 0.5
66,820 + 1.1
66,821 - -0.4
66,825 - 0.4
66,829 - -0.3
66,834 + 1.7
66,834 - -0.6
66,834 - -0.4
66,835 + 0.4
66,839 - 0.4
66,840 + 0.6
66,841 + 0.9
66,843 + 1.6
66,851 + -0.3
66,852 - -0.2
66,852 - 0.8
66,977 + -0.1
66,981 + -0.4
66,983 + 0.3
66,992 - -1.2
66,993 + 0.3
67,169 + 11378 mRNA_3010 0.13 0.4
67,171 - 11378 mRNA_3010 0.13 0.2
67,172 - 11378 mRNA_3010 0.13 0.2
67,427 + 11378 mRNA_3010 0.25 0.8
67,431 + 11378 mRNA_3010 0.25 0.4
67,742 + 11378 mRNA_3010 0.39 0.4
68,012 - 11378 mRNA_3010 0.52 0.7
68,161 + 11378 mRNA_3010 0.59 2.5
68,459 - 11378 mRNA_3010 0.72 0.3
68,716 + 11378 mRNA_3010 0.84 0.0
68,902 - -0.3
69,031 - -0.3
69,394 + -0.3
69,510 + 0.0
69,565 + 0.8
69,639 + 0.9
69,844 - -0.2
70,030 - 0.1