Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2964

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664147 to 666205 11332 mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666702 to 669525 11333

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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663,186 - 0.0
663,190 - 0.6
663,193 + -0.0
663,196 - 0.9
663,205 + -0.2
663,209 + 0.4
663,219 + 0.6
663,220 - 0.3
663,221 - 1.4
663,226 + 0.4
663,228 - 0.1
663,230 - 0.2
663,233 - 0.9
663,233 + -1.4
663,236 + 0.2
663,240 + -0.3
663,243 + 0.3
663,249 + 0.9
663,368 + 0.2
663,405 - 0.3
663,425 + -0.1
663,436 - 0.3
663,499 + 0.6
663,508 - 0.2
663,680 - -0.4
663,692 + 1.6
663,848 + 0.2
663,974 + -0.4
664,076 - 1.4
664,101 - -0.3
664,119 + -0.1
664,209 - -0.4
664,241 - 1.2
664,256 + 0.3
664,258 + 0.2
664,273 + 2.6
664,359 + 11332 mRNA_2964 0.10 -0.1
664,538 + 11332 mRNA_2964 0.19 0.1
664,686 - 11332 mRNA_2964 0.26 0.1
664,690 + 11332 mRNA_2964 0.26 0.0
664,853 + 11332 mRNA_2964 0.34 0.0
664,972 - 11332 mRNA_2964 0.40 0.2
665,018 + 11332 mRNA_2964 0.42 0.5
665,274 + 11332 mRNA_2964 0.55 -0.3
665,284 + 11332 mRNA_2964 0.55 -0.1
665,285 - 11332 mRNA_2964 0.55 0.7
665,399 - 11332 mRNA_2964 0.61 0.1
665,563 + 11332 mRNA_2964 0.69 0.4
665,693 - 11332 mRNA_2964 0.75 -0.4
665,842 + 11332 mRNA_2964 0.82 1.2
666,254 - 2.8
666,271 + -0.0
666,423 + 0.6
666,551 - -0.2
666,612 - 0.0
666,632 + -0.2
666,634 - 0.7
666,673 + -1.0
666,702 + -1.4
666,930 + 0.3
667,019 + 11333 mRNA_2965 0.11 -0.9