Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2944

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2944: 11312 - BLAST Putative CigA protein [Rhizopus microsporus], at 614601 to 617050 11312 mRNA_2945: 11313 - K15175 CDC73 parafibromin, at 617308 to 618975 11313

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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613,708 - 1.4
613,719 - -0.1
613,786 - 1.4
613,787 + 2.1
613,787 + 1.5
613,788 + 0.0
613,805 - -0.2
613,816 - -0.1
613,821 + 0.1
613,822 + 0.3
613,885 - -0.2
613,997 + 0.6
614,029 - 0.3
614,044 + 1.1
614,053 - 0.6
614,054 + -0.1
614,055 + 0.4
614,071 + 0.1
614,072 + 0.1
614,072 + -0.3
614,072 - -0.7
614,073 - 0.1
614,076 - -0.5
614,076 - 0.3
614,078 - 0.1
614,084 - 0.5
614,101 - 0.6
614,101 + -0.3
614,101 + -0.7
614,103 - 1.0
614,104 - -0.1
614,105 - 0.4
614,109 - 0.9
614,408 + 0.1
614,549 + 0.5
614,666 - -0.3
614,816 - -0.9
615,280 + 11312 mRNA_2944 0.28 -1.4
615,672 - 11312 mRNA_2944 0.44 0.4
615,834 + 11312 mRNA_2944 0.50 -0.9
616,541 - 11312 mRNA_2944 0.79 0.3
616,549 - 11312 mRNA_2944 0.80 0.5
616,565 - 11312 mRNA_2944 0.80 0.6
616,845 + -0.2
616,851 - 0.2
617,103 - 1.6
617,167 - 1.1
617,178 + 0.9
617,181 + 1.0
617,275 - -1.1
617,327 - 0.3