Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2928

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2927: 11295 - K07955 ARL8 ADP-ribosylation factor-like protein 8, at 573302 to 574331 11295 mRNA_2928: 11296 - Hypothetical Protein, at 574492 to 576496 11296 mRNA_2929: 11297 - Hypothetical Protein, at 576993 to 577700 11297

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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573,660 - 11295 mRNA_2927 0.35 1.0
574,183 + 11295 mRNA_2927 0.86 0.8
574,194 + 11295 mRNA_2927 0.87 0.2
574,314 - -0.5
574,318 - 1.4
574,328 + 0.5
574,460 + -0.1
574,460 - -0.6
574,584 - 0.1
574,620 - 0.1
574,633 - -0.2
574,637 + 0.1
574,644 - 0.4
574,648 - 0.1
574,776 - 11296 mRNA_2928 0.14 1.4
574,808 - 11296 mRNA_2928 0.16 -0.2
574,898 - 11296 mRNA_2928 0.20 1.2
575,021 - 11296 mRNA_2928 0.26 1.4
575,062 - 11296 mRNA_2928 0.28 1.0
575,064 - 11296 mRNA_2928 0.29 0.8
575,194 - 11296 mRNA_2928 0.35 0.6
575,199 + 11296 mRNA_2928 0.35 -0.3
575,548 + 11296 mRNA_2928 0.53 1.4
575,827 + 11296 mRNA_2928 0.67 1.0
576,030 - 11296 mRNA_2928 0.77 0.1
576,225 - 11296 mRNA_2928 0.86 0.6
576,245 - 11296 mRNA_2928 0.87 0.6
576,620 + 1.6
576,639 - 1.2
576,904 + 0.3
576,912 + 0.7
577,194 + 11297 mRNA_2929 0.28 -0.3