Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2927

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2926: 11294 - Hypothetical Protein, at 572041 to 573157 11294 mRNA_2927: 11295 - K07955 ARL8 ADP-ribosylation factor-like protein 8, at 573302 to 574331 11295 mRNA_2928: 11296 - Hypothetical Protein, at 574492 to 576496 11296

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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572,436 + 11294 mRNA_2926 0.35 0.7
572,444 - 11294 mRNA_2926 0.36 0.7
572,570 + 11294 mRNA_2926 0.47 0.2
572,581 - 11294 mRNA_2926 0.48 0.2
572,865 - 11294 mRNA_2926 0.74 1.9
572,876 + 11294 mRNA_2926 0.75 0.5
572,884 + 11294 mRNA_2926 0.75 0.1
572,952 + 11294 mRNA_2926 0.82 -0.4
572,957 - 11294 mRNA_2926 0.82 0.3
573,184 + 2.7
573,193 - -0.0
573,198 + 1.0
573,364 + 0.1
573,366 - 0.1
573,451 + 11295 mRNA_2927 0.14 -0.7
573,458 + 11295 mRNA_2927 0.15 0.3
573,460 + 11295 mRNA_2927 0.15 -0.7
573,660 - 11295 mRNA_2927 0.35 1.0
574,183 + 11295 mRNA_2927 0.86 0.8
574,194 + 11295 mRNA_2927 0.87 0.2
574,314 - -0.5
574,318 - 1.4
574,328 + 0.5
574,460 + -0.1
574,460 - -0.6
574,584 - 0.1
574,620 - 0.1
574,633 - -0.2
574,637 + 0.1
574,644 - 0.4
574,648 - 0.1
574,776 - 11296 mRNA_2928 0.14 1.4
574,808 - 11296 mRNA_2928 0.16 -0.2
574,898 - 11296 mRNA_2928 0.20 1.2
575,021 - 11296 mRNA_2928 0.26 1.4
575,062 - 11296 mRNA_2928 0.28 1.0
575,064 - 11296 mRNA_2928 0.29 0.8
575,194 - 11296 mRNA_2928 0.35 0.6
575,199 + 11296 mRNA_2928 0.35 -0.3