Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2926

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2925: 11293 - K03030 PSMD14, RPN11, POH1 26S proteasome regulatory subunit N11, at 570849 to 571975 11293 mRNA_2926: 11294 - Hypothetical Protein, at 572041 to 573157 11294 mRNA_2927: 11295 - K07955 ARL8 ADP-ribosylation factor-like protein 8, at 573302 to 574331 11295

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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571,975 + 0.5
571,986 + 0.6
572,295 + 11294 mRNA_2926 0.23 -0.6
572,436 + 11294 mRNA_2926 0.35 0.7
572,444 - 11294 mRNA_2926 0.36 0.7
572,570 + 11294 mRNA_2926 0.47 0.2
572,581 - 11294 mRNA_2926 0.48 0.2
572,865 - 11294 mRNA_2926 0.74 1.9
572,876 + 11294 mRNA_2926 0.75 0.5
572,884 + 11294 mRNA_2926 0.75 0.1
572,952 + 11294 mRNA_2926 0.82 -0.4
572,957 - 11294 mRNA_2926 0.82 0.3
573,184 + 2.7
573,193 - -0.0
573,198 + 1.0
573,364 + 0.1
573,366 - 0.1
573,451 + 11295 mRNA_2927 0.14 -0.7
573,458 + 11295 mRNA_2927 0.15 0.3
573,460 + 11295 mRNA_2927 0.15 -0.7
573,660 - 11295 mRNA_2927 0.35 1.0