Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2913

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521953 to 523755 11280 mRNA_2913: 11281 - K13703 ABHD11 abhydrolase domain-containing protein 11, at 524044 to 525341 11281

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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523,496 - 11280 mRNA_2912 0.86 -0.1
523,618 - -1.8
523,779 - -0.3
524,225 - 11281 mRNA_2913 0.14 -0.4
524,231 - 11281 mRNA_2913 0.14 0.7
524,608 + 11281 mRNA_2913 0.43 -1.3
524,755 - 11281 mRNA_2913 0.55 0.2
524,920 - 11281 mRNA_2913 0.67 -0.4
525,072 - 11281 mRNA_2913 0.79 0.1
525,076 - 11281 mRNA_2913 0.80 -0.9
525,084 - 11281 mRNA_2913 0.80 0.2
525,109 + 11281 mRNA_2913 0.82 0.3
525,246 - 0.4
525,377 + 0.1
525,387 - 1.4
525,618 - -0.4
525,627 - -0.7
525,628 - 0.2
525,711 + 1.9
525,770 - 2.2
525,806 - 0.7
525,839 + 0.4
525,840 - 0.6
525,841 + 0.1
525,893 - 0.2
525,903 + -0.1
525,934 - 0.4
525,943 + 0.8
526,072 - -0.3
526,078 - 0.5
526,081 + -0.4
526,084 + 0.1
526,179 + 0.6
526,235 - -0.0
526,247 + 0.7
526,251 + -0.1