Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2843

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2842: 11210 - Hypothetical Protein, at 341749 to 343529 11210 mRNA_2843: 11211 - Hypothetical Protein, at 343923 to 345879 11211 mRNA_2844: 11212 - SUPERFAMILY--SSF54427, at 346316 to 346839 11212

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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343,015 + 11210 mRNA_2842 0.71 0.2
343,139 - 11210 mRNA_2842 0.78 0.9
343,396 - 0.2
343,626 - -0.4
343,707 + -0.3
343,738 - 0.6
343,882 - -0.2
344,390 + 11211 mRNA_2843 0.24 -0.2
344,396 - 11211 mRNA_2843 0.24 -0.5
344,640 + 11211 mRNA_2843 0.37 -0.7
344,792 - 11211 mRNA_2843 0.44 0.6
344,868 - 11211 mRNA_2843 0.48 0.3
344,875 + 11211 mRNA_2843 0.49 -0.3
344,905 + 11211 mRNA_2843 0.50 0.3
344,978 + 11211 mRNA_2843 0.54 -0.7
345,074 - 11211 mRNA_2843 0.59 0.7
345,294 + 11211 mRNA_2843 0.70 0.8
345,319 - 11211 mRNA_2843 0.71 0.8
345,369 + 11211 mRNA_2843 0.74 -0.2
345,701 - 0.9
346,018 - 0.0
346,185 - -0.9
346,196 + 0.4
346,241 + 2.0
346,512 - 11212 mRNA_2844 0.37 0.0
346,535 + 11212 mRNA_2844 0.42 0.5
346,685 + 11212 mRNA_2844 0.70 -0.1
346,802 - -0.0
346,823 - 1.4