Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2832

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2831: 11199 - HMMPfam-short chain dehydrogenase-PF00106,PRINTS-Glucose/ribitol dehydrogenase family signature-PR00081,SMART--SM00822,SUPERFAMILY--SSF51735, at 318054 to 319183 11199 mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319587 to 320810 11200 mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321440 to 324159 11201

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
318,672 + 11199 mRNA_2831 0.55 0.8
318,879 - 11199 mRNA_2831 0.73 0.2
319,034 - 11199 mRNA_2831 0.87 1.3
319,255 - 1.6
319,302 + 0.2
319,520 - 0.1
319,660 - 0.7
319,846 - 11200 mRNA_2832 0.21 -0.4
320,178 - 11200 mRNA_2832 0.48 1.6
320,297 + 11200 mRNA_2832 0.58 0.7
320,329 - 11200 mRNA_2832 0.61 -0.5
320,338 - 11200 mRNA_2832 0.61 0.6
320,705 - 0.6
320,714 + -0.0
320,719 - 0.1
320,723 - 0.1
320,781 + -0.4
320,785 - 0.3
320,815 + -1.6
320,857 + -0.3
320,863 + -0.2
320,870 - -0.0
320,974 - 1.8
321,094 + -0.3
321,573 - -0.5
321,592 + 0.7
321,749 + 11201 mRNA_2833 0.11 1.2