Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2824

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2823: 11191 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 303480 to 304770 11191 mRNA_2824: 11192 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 304875 to 305755 11192

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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303,939 - 11191 mRNA_2823 0.36 -1.0
303,945 + 11191 mRNA_2823 0.36 0.6
303,952 - 11191 mRNA_2823 0.37 -0.1
303,962 + 11191 mRNA_2823 0.37 0.2
303,964 + 11191 mRNA_2823 0.37 1.7
304,045 - 11191 mRNA_2823 0.44 -0.5
304,090 + 11191 mRNA_2823 0.47 0.1
304,091 - 11191 mRNA_2823 0.47 -0.1
304,118 - 11191 mRNA_2823 0.49 1.4
304,131 + 11191 mRNA_2823 0.50 0.9
304,134 - 11191 mRNA_2823 0.51 0.8
304,237 - 11191 mRNA_2823 0.59 -0.1
304,294 - 11191 mRNA_2823 0.63 -0.5
304,294 - 11191 mRNA_2823 0.63 0.6
304,300 + 11191 mRNA_2823 0.64 0.4
304,300 + 11191 mRNA_2823 0.64 -0.6
304,321 - 11191 mRNA_2823 0.65 0.2
304,386 - 11191 mRNA_2823 0.70 0.9
304,400 + 11191 mRNA_2823 0.71 0.3
304,485 - 11191 mRNA_2823 0.78 -0.6
304,526 - 11191 mRNA_2823 0.81 -1.4
304,555 + 11191 mRNA_2823 0.83 0.5
304,582 + 11191 mRNA_2823 0.85 0.1
304,832 + 0.6
304,832 + 0.4
305,177 - 11192 mRNA_2824 0.34 -0.5
305,269 - 11192 mRNA_2824 0.45 -1.8
305,467 - 11192 mRNA_2824 0.67 -0.0
305,590 + 11192 mRNA_2824 0.81 0.4
305,739 - 0.4
306,149 + -0.0
306,422 - -0.3
306,435 + 0.2
306,453 - 0.6
306,459 - -0.7
306,464 + 0.3
306,472 + 0.5
306,602 - 0.4
306,616 - 0.0
306,617 - -2.0
306,620 + 0.5
306,633 - -1.3
306,678 + 0.4
306,683 + -0.1
306,686 - 0.2
306,726 - 0.2
306,750 + 0.3