Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2745

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120762 to 122799 11112 mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123749 to 127463 11113 mRNA_2746: 11114 - K00859 coaE dephospho-CoA kinase, at 127700 to 128562 11114

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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122,753 + -0.0
122,878 - -0.3
122,988 - -0.7
122,995 + 1.0
122,996 - 0.4
123,012 + 0.6
123,013 + -0.3
123,033 + -0.5
123,038 - -0.1
123,041 + 0.1
123,051 - -1.4
123,059 - 0.4
123,060 + 0.4
123,069 + 0.3
123,069 + -1.4
123,071 - 0.3
123,073 + 0.7
123,082 + 0.6
123,105 + -0.0
123,112 - 0.1
123,122 + 0.4
123,151 + 0.5
123,166 + 0.5
123,173 - -0.3
123,173 - 0.1
123,178 + -1.7
123,188 - -0.2
123,202 + 0.2
123,210 + 0.1
123,315 - -0.3
123,394 + -0.2
123,422 - 0.1
123,442 - 0.5
123,474 + -0.4
123,487 - -0.1
123,499 + 0.1
123,502 + 2.3
123,517 + -1.3
123,518 - 0.4
123,547 + 0.1
123,548 - 2.3
123,562 + 0.1
123,573 + 0.1
123,590 - 0.5
123,605 - -0.6
123,608 - -0.8
123,672 + 0.2
123,690 + 1.6
123,725 + 1.1
123,749 + 0.6
123,750 - 0.4
123,863 - 0.4
123,871 + 0.0
123,901 + 0.2
124,183 + 11113 mRNA_2745 0.12 0.2
124,185 - 11113 mRNA_2745 0.12 0.5
124,353 - 11113 mRNA_2745 0.16 0.9
124,355 - 11113 mRNA_2745 0.16 0.4
124,414 - 11113 mRNA_2745 0.18 -0.4
124,458 + 11113 mRNA_2745 0.19 0.5
124,709 - 11113 mRNA_2745 0.26 0.5
124,794 - 11113 mRNA_2745 0.28 0.2
124,794 + 11113 mRNA_2745 0.28 0.1
125,041 + 11113 mRNA_2745 0.35 0.6
125,048 - 11113 mRNA_2745 0.35 -2.1
125,398 - 11113 mRNA_2745 0.44 -0.4
125,714 + 11113 mRNA_2745 0.53 0.4
125,794 + 11113 mRNA_2745 0.55 -0.4
125,855 + 11113 mRNA_2745 0.57 0.6
125,941 + 11113 mRNA_2745 0.59 1.9
126,259 - 11113 mRNA_2745 0.68 0.1
126,267 + 11113 mRNA_2745 0.68 0.2
126,362 + 11113 mRNA_2745 0.70 -0.3
126,570 + 11113 mRNA_2745 0.76 -0.9
126,715 + 11113 mRNA_2745 0.80 0.5
126,720 - 11113 mRNA_2745 0.80 0.5
126,846 + 11113 mRNA_2745 0.83 1.2
126,969 - 11113 mRNA_2745 0.87 0.0
126,969 - 11113 mRNA_2745 0.87 0.4
127,054 + 11113 mRNA_2745 0.89 -0.5
127,325 + -0.6
127,413 + -0.4
127,419 + 0.2
127,434 - 0.7