Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2714

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2714: 11082 - KOG2477 Uncharacterized conserved protein, at 63364 to 66371 11082 mRNA_2715: 11083 - Hypothetical Protein, at 66913 to 70114 11083

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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62,378 + 0.0
62,383 - -0.6
62,389 + -0.1
62,390 - -0.8
62,396 - -0.0
62,398 - 0.1
62,399 - 1.7
62,406 + -0.3
62,407 + 0.2
62,410 + 0.2
62,413 + -0.1
62,416 + 0.3
62,422 + 1.2
62,427 + 0.4
62,428 - -0.4
62,432 + 0.5
62,505 - 0.0
62,512 - 0.9
62,515 - 0.9
62,533 + -0.0
62,536 - 0.0
62,546 + 0.3
62,557 + 0.4
62,564 - 2.0
62,565 + -0.3
62,567 - 0.3
62,696 + -0.1
62,699 + 0.0
62,709 + -0.4
62,710 - 0.1
62,711 - -1.3
62,724 + 1.1
62,726 - 0.4
62,731 + -0.1
62,741 + -0.4
62,743 - 0.9
62,752 - -0.4
62,786 - 0.5
62,790 - 0.7
62,790 - 0.2
62,792 - 1.8
62,796 + 0.1
62,807 - 0.8
62,815 - 0.7
62,819 + -0.4
62,831 + -0.1
62,843 + -0.4
62,882 - -0.2
62,882 + -0.5
62,897 - 0.7
62,899 + 0.3
62,919 - 0.1
62,919 + -0.1
62,920 + 0.2
62,922 + -0.3
62,930 - -0.6
62,930 + -0.4
62,934 + 0.5
62,935 + -0.5
63,003 + -0.1
63,109 - 0.4
63,124 - 0.3
63,124 + -0.7
63,137 + -0.3
63,223 - 1.8
63,283 - -0.4
64,443 - 11082 mRNA_2714 0.36 1.4
64,445 - 11082 mRNA_2714 0.36 1.1
64,768 - 11082 mRNA_2714 0.47 0.6
64,801 + 11082 mRNA_2714 0.48 -0.3
64,921 - 11082 mRNA_2714 0.52 0.7
65,158 - 11082 mRNA_2714 0.60 0.3
65,192 - 11082 mRNA_2714 0.61 0.0
65,256 + 11082 mRNA_2714 0.63 0.4
66,052 - 11082 mRNA_2714 0.89 -0.5
66,444 - -0.3
66,497 - 0.2
66,531 - -1.0
66,643 + 0.7
66,788 - -0.1
66,919 - 0.1
66,979 + 0.4
66,981 - -0.5