Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2712

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2711: 11079 - K01098 CET1 polynucleotide 5'-triphosphatase, at 56930 to 58742 11079 mRNA_2712: 11080 - KOG4648 Uncharacterized conserved protein, contains LRR repeats, at 58923 to 60414 11080 mRNA_2713: 11081 - BLAST Clp1-like protein, putative [Rhizoctonia solani AG-3 ..., at 60604 to 61559 11081

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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58,890 - 0.1
59,012 - -0.9
59,174 + 11080 mRNA_2712 0.17 0.1
59,328 + 11080 mRNA_2712 0.27 0.8
59,421 - 11080 mRNA_2712 0.33 -0.1
59,650 - 11080 mRNA_2712 0.49 -0.4
59,772 - 11080 mRNA_2712 0.57 1.5
60,232 - 11080 mRNA_2712 0.88 0.3
60,480 - 0.5
60,723 + 11081 mRNA_2713 0.12 0.2
61,348 - 11081 mRNA_2713 0.78 1.2