Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2689

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2688: 11056 - Hypothetical Protein, at 8682 to 9968 11056 mRNA_2689: 11057 - K07422 CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1, at 10233 to 12338 11057

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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9,677 - 11056 mRNA_2688 0.77 1.0
9,797 - 11056 mRNA_2688 0.87 0.5
9,923 + 1.7
10,066 + 0.1
10,122 + 0.0
10,352 - 1.6
10,613 - 11057 mRNA_2689 0.18 0.1
10,676 + 11057 mRNA_2689 0.21 -0.0
10,948 + 11057 mRNA_2689 0.34 0.2
10,955 + 11057 mRNA_2689 0.34 0.3
10,955 + 11057 mRNA_2689 0.34 0.2
10,955 + 11057 mRNA_2689 0.34 0.2
11,175 - 11057 mRNA_2689 0.45 0.4
11,213 - 11057 mRNA_2689 0.47 -1.1
11,248 - 11057 mRNA_2689 0.48 0.4
11,374 + 11057 mRNA_2689 0.54 -0.5
11,433 - 11057 mRNA_2689 0.57 0.8
11,536 + 11057 mRNA_2689 0.62 -0.6
11,554 + 11057 mRNA_2689 0.63 0.1
11,733 + 11057 mRNA_2689 0.71 0.3
11,734 + 11057 mRNA_2689 0.71 0.4
11,792 + 11057 mRNA_2689 0.74 1.0
11,847 - 11057 mRNA_2689 0.77 1.0
11,848 + 11057 mRNA_2689 0.77 0.3
11,960 + 11057 mRNA_2689 0.82 1.1
12,147 + 0.5
12,260 - 0.3
12,300 - 1.4
12,308 + 0.9
12,338 + -0.0
12,402 + 0.0
12,411 - 0.4
12,416 + 0.9
12,438 + -0.7
12,445 + -0.1
12,446 - 0.5
12,447 + 1.2
12,454 + 0.6
12,457 + 0.7
12,492 - 0.4
12,548 - 0.6
12,631 + -0.4
12,650 - 0.8
12,895 + 0.0
13,053 - -0.1
13,057 - 0.0
13,068 + 0.0
13,229 + 0.5
13,313 + -0.6