Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2688

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2687: 11055 - K16542 CDK5RAP2 CDK5 regulatory subunit-associated protein 2, at 3683 to 8144 11055 mRNA_2688: 11056 - Hypothetical Protein, at 8682 to 9968 11056 mRNA_2689: 11057 - K07422 CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1, at 10233 to 12338 11057

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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8,187 - -1.5
8,190 - -1.1
8,203 + -1.2
8,306 - -0.1
8,314 - 1.0
8,316 + -0.7
8,317 + 0.2
8,445 + 0.4
8,455 + 0.7
8,459 - 0.0
8,473 - 1.1
8,478 + -0.2
8,604 - 0.6
8,709 - 0.8
8,754 + -0.1
9,211 - 11056 mRNA_2688 0.41 2.5
9,677 - 11056 mRNA_2688 0.77 1.0
9,797 - 11056 mRNA_2688 0.87 0.5
9,923 + 1.7
10,066 + 0.1
10,122 + 0.0
10,352 - 1.6
10,613 - 11057 mRNA_2689 0.18 0.1
10,676 + 11057 mRNA_2689 0.21 -0.0
10,948 + 11057 mRNA_2689 0.34 0.2
10,955 + 11057 mRNA_2689 0.34 0.3
10,955 + 11057 mRNA_2689 0.34 0.2
10,955 + 11057 mRNA_2689 0.34 0.2