Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2669

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2668: 11036 - K00049 GRHPR glyoxylate/hydroxypyruvate reductase, at 720997 to 722358 11036 mRNA_2669: 11037 - Hypothetical Protein, at 722649 to 723844 11037 mRNA_2670: 11038 - SUPERFAMILY--SSF52058, at 724183 to 725340 11038

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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721,691 - 11036 mRNA_2668 0.51 0.2
721,694 + 11036 mRNA_2668 0.51 0.2
722,091 + 11036 mRNA_2668 0.80 0.8
722,110 + 11036 mRNA_2668 0.82 0.4
722,114 - 11036 mRNA_2668 0.82 -0.6
722,139 + 11036 mRNA_2668 0.84 -1.3
722,269 + -0.1
722,273 + 2.7
722,291 + 1.9
722,366 - 0.7
722,399 - -0.4
722,400 - -2.3
722,411 + 0.9
722,456 + 0.8
722,457 + 2.2
723,423 - 11037 mRNA_2669 0.65 1.1
723,524 - 11037 mRNA_2669 0.73 0.7
723,566 - 11037 mRNA_2669 0.77 1.5
723,572 + 11037 mRNA_2669 0.77 1.3
723,587 + 11037 mRNA_2669 0.78 0.2
723,674 + 11037 mRNA_2669 0.86 2.0
723,718 - 11037 mRNA_2669 0.89 0.6
723,729 + 0.7
723,744 + 0.5
723,868 + 0.9
723,882 - 1.0
723,882 - 0.1
723,886 - 0.9
723,886 - -0.2
724,086 + -0.2
724,089 + 1.6
724,220 - 0.3
724,229 + 1.4
724,230 + 0.2
724,683 + 11038 mRNA_2670 0.43 0.7
724,791 + 11038 mRNA_2670 0.53 2.5