Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2644

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2643: 11011 - K01254 LTA4H leukotriene-A4 hydrolase, at 661173 to 664262 11011 mRNA_2644: 11012 - SUPERFAMILY--SSF52058, at 664432 to 665418 11012 mRNA_2645: 11013 - Hypothetical Protein, at 665744 to 666738 11013

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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663,447 + 11011 mRNA_2643 0.74 -0.7
663,624 - 11011 mRNA_2643 0.79 0.5
663,770 + 11011 mRNA_2643 0.84 0.4
663,897 + 11011 mRNA_2643 0.88 1.0
664,051 - -0.1
664,272 + 0.3
664,351 + 0.1
664,428 - 0.5
664,460 + 0.1
664,478 + 0.8
664,481 - 0.3
664,487 + -0.3
664,604 - 11012 mRNA_2644 0.17 0.7
665,337 - 0.7
665,575 - -0.6
665,655 + -0.2
665,794 - 1.3
665,794 - -0.1
665,888 + 11013 mRNA_2645 0.14 -0.6
665,934 + 11013 mRNA_2645 0.19 1.2
666,100 - 11013 mRNA_2645 0.36 -0.1
666,102 + 11013 mRNA_2645 0.36 0.0
666,207 + 11013 mRNA_2645 0.47 -0.4
666,375 + 11013 mRNA_2645 0.63 -0.1