Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2632

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2632: 11000 - Hypothetical Protein, at 636103 to 638450 11000 mRNA_2633: 11001 - HMMPfam-Nucleotidyl transferase-PF00483,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF56112,SUPERFAMILY--SSF56784, at 638578 to 641420 11001

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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635,288 + 0.4
635,445 + 0.7
635,468 - 2.3
635,733 - 0.3
635,736 - 0.3
635,859 - 0.1
635,877 + -0.0
635,884 - 0.3
635,908 - -0.5
635,930 + -0.5
635,941 + 1.5
635,990 - -0.2
636,026 + 0.1
636,060 - -0.1
636,061 + -0.1
636,158 - 0.6
636,242 - -0.2
636,256 + 0.6
636,356 - 11000 mRNA_2632 0.11 -0.0
636,402 + 11000 mRNA_2632 0.13 0.1
636,619 + 11000 mRNA_2632 0.22 0.5
636,943 + 11000 mRNA_2632 0.36 -0.3
636,943 + 11000 mRNA_2632 0.36 0.8
637,064 - 11000 mRNA_2632 0.41 0.2
637,239 + 11000 mRNA_2632 0.48 0.2
637,360 + 11000 mRNA_2632 0.54 0.5
637,493 - 11000 mRNA_2632 0.59 0.8
637,547 + 11000 mRNA_2632 0.61 -0.0
637,722 - 11000 mRNA_2632 0.69 0.4
637,722 - 11000 mRNA_2632 0.69 0.1
637,730 + 11000 mRNA_2632 0.69 0.2
637,835 + 11000 mRNA_2632 0.74 0.2
637,967 - 11000 mRNA_2632 0.79 -0.3
637,994 - 11000 mRNA_2632 0.81 -0.2
638,111 + 11000 mRNA_2632 0.86 -0.1
638,157 - 11000 mRNA_2632 0.87 0.4
638,689 + -0.6
638,943 + 11001 mRNA_2633 0.13 1.7
638,973 + 11001 mRNA_2633 0.14 0.5
639,105 - 11001 mRNA_2633 0.19 1.2
639,206 + 11001 mRNA_2633 0.22 0.7
639,304 - 11001 mRNA_2633 0.26 0.2
639,394 + 11001 mRNA_2633 0.29 1.2