Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2631

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998 mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632765 to 634825 10999

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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631,782 + 10998 mRNA_2630 0.82 0.4
631,877 + 10998 mRNA_2630 0.85 -0.0
631,898 - 10998 mRNA_2630 0.86 2.3
631,935 - 10998 mRNA_2630 0.88 0.4
632,336 - -1.1
632,340 + 0.1
632,349 - 0.3
632,383 + -0.6
632,474 - 0.0
632,477 - 1.1
632,732 - -1.4
632,735 - 3.2
632,736 + -1.3
633,064 + 10999 mRNA_2631 0.15 -1.1
633,084 + 10999 mRNA_2631 0.15 0.8
633,543 - 10999 mRNA_2631 0.38 0.8
633,649 + 10999 mRNA_2631 0.43 -0.4
633,660 - 10999 mRNA_2631 0.43 0.3
633,699 - 10999 mRNA_2631 0.45 -0.2
634,194 + 10999 mRNA_2631 0.69 0.5
634,229 - 10999 mRNA_2631 0.71 -0.7
634,229 - 10999 mRNA_2631 0.71 -0.8
634,251 + 10999 mRNA_2631 0.72 0.8
634,487 - 10999 mRNA_2631 0.84 1.6
634,532 - 10999 mRNA_2631 0.86 0.9
634,549 + 10999 mRNA_2631 0.87 0.0
634,563 + 10999 mRNA_2631 0.87 -0.4
634,688 - 0.2
634,689 + 0.6
634,697 + 0.5
634,826 + 1.8
634,830 - 0.4
634,835 + 0.8
634,993 - -0.1
634,994 - -0.4
634,995 - -0.2
634,996 + 0.2
635,003 + 0.2
635,013 + -0.4
635,018 + -0.7
635,024 + -0.7
635,024 + -0.6
635,033 - -0.1
635,034 - -1.0
635,288 + 0.4
635,445 + 0.7
635,468 - 2.3
635,733 - 0.3
635,736 - 0.3