Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2614

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2613: 10981 - K00223 ERG4 Delta24(24(1))-sterol reductase, at 594980 to 596945 10981 mRNA_2614: 10982 - K18050 PRKCE novel protein kinase C epsilon type, at 597517 to 601558 10982 mRNA_2615: 10983 - K14775 UTP30, RSL1D1 ribosome biogenesis protein UTP30, at 602494 to 603879 10983

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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596,992 - 0.3
597,003 - 0.7
597,050 - -0.2
597,285 + 0.9
597,287 + 0.5
597,291 - 1.2
597,293 - -0.8
597,299 - 0.3
597,302 - 0.2
597,317 - 1.7
597,447 + -0.5
597,475 + -0.2
597,838 - -0.2
598,159 + 10982 mRNA_2614 0.16 -1.1
602,193 + 0.2
602,196 + -1.3
602,291 + 0.7
602,334 - 0.8
602,344 - -0.8
602,377 - -0.3