Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2605

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2604: 10972 - BLAST Esterase, SGNH hydrolase-type domain protein [Rho..., at 575232 to 576935 10972 mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577060 to 580725 10973 mRNA_2606: 10974 - Hypothetical Protein, at 581408 to 582467 10974

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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576,119 - 10972 mRNA_2604 0.52 0.8
576,370 + 10972 mRNA_2604 0.67 -0.8
576,557 + 10972 mRNA_2604 0.78 -0.3
576,836 + -0.1
576,973 + 0.6
576,974 - -0.2
576,975 + -0.1
576,978 - 0.5
576,995 + 0.1
576,996 + 1.0
576,999 + 0.4
576,999 + 0.7
577,002 - -0.6
577,003 + 1.0
577,007 + 0.1
577,008 + 0.6
577,013 - 0.0
577,022 + 0.1
577,144 + -1.0
577,147 - 0.8
577,148 - 0.4
577,151 - 0.2
577,152 + -0.4
577,156 - -0.2
577,159 + 0.4
577,288 - 0.4
577,301 + 1.0
577,305 + -0.1
577,322 + 0.4
577,438 - 10973 mRNA_2605 0.10 0.4
577,468 - 10973 mRNA_2605 0.11 2.1
577,589 - 10973 mRNA_2605 0.14 0.2
577,589 - 10973 mRNA_2605 0.14 0.2
577,598 + 10973 mRNA_2605 0.15 0.5
577,628 + 10973 mRNA_2605 0.15 -0.5
577,693 - 10973 mRNA_2605 0.17 1.2
577,718 + 10973 mRNA_2605 0.18 1.2
577,726 + 10973 mRNA_2605 0.18 1.5
578,052 - 10973 mRNA_2605 0.27 0.0
578,052 + 10973 mRNA_2605 0.27 0.8
578,168 + 10973 mRNA_2605 0.30 0.0
578,443 - 10973 mRNA_2605 0.38 -0.7
578,604 + 10973 mRNA_2605 0.42 0.7
578,612 - 10973 mRNA_2605 0.42 -1.4
578,622 - 10973 mRNA_2605 0.43 -0.4
578,748 - 10973 mRNA_2605 0.46 -0.4
578,767 - 10973 mRNA_2605 0.47 1.0
578,790 + 10973 mRNA_2605 0.47 0.0
578,817 + 10973 mRNA_2605 0.48 0.1
578,906 - 10973 mRNA_2605 0.50 -0.0
578,952 + 10973 mRNA_2605 0.52 0.1
579,038 - 10973 mRNA_2605 0.54 1.1
579,060 + 10973 mRNA_2605 0.55 0.3
579,172 + 10973 mRNA_2605 0.58 -0.1
579,214 + 10973 mRNA_2605 0.59 0.5
579,219 + 10973 mRNA_2605 0.59 -0.7
579,346 - 10973 mRNA_2605 0.62 0.6
579,541 - 10973 mRNA_2605 0.68 1.0
579,804 + 10973 mRNA_2605 0.75 0.4
579,951 + 10973 mRNA_2605 0.79 0.6
579,952 - 10973 mRNA_2605 0.79 1.8
579,959 + 10973 mRNA_2605 0.79 0.4
580,201 - 10973 mRNA_2605 0.86 2.2
580,229 - 10973 mRNA_2605 0.86 0.2
580,263 + 10973 mRNA_2605 0.87 0.9
580,300 - 10973 mRNA_2605 0.88 -1.1
580,561 - 1.2
580,687 + -0.5
580,693 + 1.4
580,695 + -0.3
580,793 - -0.7
580,849 + 0.2
580,938 + -0.5
580,974 + 0.3
580,981 - -0.5
580,985 + 0.4
580,997 + 0.2
581,004 + -0.1
581,111 - 0.5
581,126 - -0.1
581,275 - 0.5
581,275 + 0.4
581,440 - -0.0
581,722 + 10974 mRNA_2606 0.30 0.2
581,725 - 10974 mRNA_2606 0.30 -2.4