Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2590

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2589: 10957 - Hypothetical Protein, at 547993 to 548642 10957 mRNA_2590: 10958 - Hypothetical Protein, at 549148 to 549789 10958 mRNA_2591: 10959 - Hypothetical Protein, at 550194 to 551919 10959

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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548,254 + 10957 mRNA_2589 0.40 -0.7
548,370 - 10957 mRNA_2589 0.58 -0.7
548,488 - 10957 mRNA_2589 0.76 -0.4
548,768 + 0.4
548,928 - 0.5
548,997 + 1.3
549,072 + 0.3
549,099 + 0.5
549,113 + 0.1
549,225 - 10958 mRNA_2590 0.12 0.8
549,239 + 10958 mRNA_2590 0.14 0.9
549,287 + 10958 mRNA_2590 0.22 0.4
549,299 + 10958 mRNA_2590 0.24 0.2
549,349 + 10958 mRNA_2590 0.31 -0.8
549,352 + 10958 mRNA_2590 0.32 0.6
549,360 + 10958 mRNA_2590 0.33 -0.0
549,365 - 10958 mRNA_2590 0.34 0.1
549,370 + 10958 mRNA_2590 0.35 1.1
549,373 + 10958 mRNA_2590 0.35 0.4
549,374 + 10958 mRNA_2590 0.35 0.0
549,375 - 10958 mRNA_2590 0.35 0.9
549,378 - 10958 mRNA_2590 0.36 -0.7
549,382 + 10958 mRNA_2590 0.36 -0.0
549,383 + 10958 mRNA_2590 0.37 0.4
549,385 - 10958 mRNA_2590 0.37 0.5
549,386 + 10958 mRNA_2590 0.37 1.2
549,391 + 10958 mRNA_2590 0.38 1.3
549,398 - 10958 mRNA_2590 0.39 0.7
549,400 + 10958 mRNA_2590 0.39 0.0
549,402 - 10958 mRNA_2590 0.40 0.0
549,406 + 10958 mRNA_2590 0.40 -1.2
549,412 + 10958 mRNA_2590 0.41 0.9
549,412 + 10958 mRNA_2590 0.41 -0.2
549,414 + 10958 mRNA_2590 0.41 1.3
549,422 + 10958 mRNA_2590 0.43 0.4
549,429 - 10958 mRNA_2590 0.44 0.4
549,435 + 10958 mRNA_2590 0.45 1.2
549,435 + 10958 mRNA_2590 0.45 1.0
549,437 + 10958 mRNA_2590 0.45 0.5
549,439 - 10958 mRNA_2590 0.45 0.0
549,441 - 10958 mRNA_2590 0.46 0.1
549,442 + 10958 mRNA_2590 0.46 0.8
549,443 - 10958 mRNA_2590 0.46 0.1
549,447 + 10958 mRNA_2590 0.47 -0.4
549,448 + 10958 mRNA_2590 0.47 0.7
549,448 - 10958 mRNA_2590 0.47 -0.3
549,449 + 10958 mRNA_2590 0.47 0.8
549,449 - 10958 mRNA_2590 0.47 0.4
549,461 + 10958 mRNA_2590 0.49 1.2
549,469 + 10958 mRNA_2590 0.50 0.3
549,469 + 10958 mRNA_2590 0.50 0.4
549,470 + 10958 mRNA_2590 0.50 0.1
549,478 + 10958 mRNA_2590 0.51 1.5
549,479 + 10958 mRNA_2590 0.52 0.2
549,490 + 10958 mRNA_2590 0.53 0.2
549,508 - 10958 mRNA_2590 0.56 0.1
549,517 - 10958 mRNA_2590 0.57 -0.9
549,533 + 10958 mRNA_2590 0.60 0.3
549,543 + 10958 mRNA_2590 0.62 0.7
549,555 + 10958 mRNA_2590 0.63 -0.4
549,574 - 10958 mRNA_2590 0.66 0.5
549,574 - 10958 mRNA_2590 0.66 0.3
549,575 + 10958 mRNA_2590 0.67 0.6
549,577 - 10958 mRNA_2590 0.67 -0.3
549,578 - 10958 mRNA_2590 0.67 0.9
549,581 - 10958 mRNA_2590 0.67 0.6
549,583 - 10958 mRNA_2590 0.68 0.6
549,587 - 10958 mRNA_2590 0.68 0.7
549,588 + 10958 mRNA_2590 0.69 0.6
549,593 - 10958 mRNA_2590 0.69 -0.1
549,593 + 10958 mRNA_2590 0.69 0.5
549,594 - 10958 mRNA_2590 0.69 -0.5
549,595 - 10958 mRNA_2590 0.70 0.7
549,596 + 10958 mRNA_2590 0.70 -0.4
549,600 + 10958 mRNA_2590 0.70 0.6
549,600 + 10958 mRNA_2590 0.70 -0.5
549,605 - 10958 mRNA_2590 0.71 0.8
549,606 + 10958 mRNA_2590 0.71 1.6
549,607 + 10958 mRNA_2590 0.71 0.1
549,612 + 10958 mRNA_2590 0.72 0.7
549,614 + 10958 mRNA_2590 0.73 1.3
549,629 - 10958 mRNA_2590 0.75 0.1
549,632 + 10958 mRNA_2590 0.75 1.0
549,639 + 10958 mRNA_2590 0.76 0.4
549,640 - 10958 mRNA_2590 0.77 1.0
549,649 + 10958 mRNA_2590 0.78 0.1
549,651 - 10958 mRNA_2590 0.78 0.6
549,654 - 10958 mRNA_2590 0.79 1.1
549,655 + 10958 mRNA_2590 0.79 -1.3
549,656 + 10958 mRNA_2590 0.79 -0.7
549,657 + 10958 mRNA_2590 0.79 0.6
549,661 + 10958 mRNA_2590 0.80 0.0
549,661 - 10958 mRNA_2590 0.80 0.4
549,665 - 10958 mRNA_2590 0.81 1.0
549,665 - 10958 mRNA_2590 0.81 1.1
549,668 - 10958 mRNA_2590 0.81 0.1
549,669 + 10958 mRNA_2590 0.81 -0.1
549,675 - 10958 mRNA_2590 0.82 0.9
549,677 - 10958 mRNA_2590 0.82 0.5
549,678 - 10958 mRNA_2590 0.83 0.7
549,680 + 10958 mRNA_2590 0.83 0.2
549,685 + 10958 mRNA_2590 0.84 -0.1
549,685 + 10958 mRNA_2590 0.84 0.3
549,691 + 10958 mRNA_2590 0.85 1.2
549,704 - 10958 mRNA_2590 0.87 -0.1
549,706 + 10958 mRNA_2590 0.87 0.0
549,710 - 10958 mRNA_2590 0.88 -0.2
549,715 - 10958 mRNA_2590 0.88 0.1
549,716 + 10958 mRNA_2590 0.88 1.2
549,761 + -0.1
549,818 - 1.2
549,819 + 0.5
549,821 - 1.3
549,825 - -0.8
549,829 + 0.6
549,830 - 0.6
549,837 + 1.0
549,841 + -0.5
549,846 + 0.9
549,849 - 1.1
549,850 + 1.9
549,859 + 0.3
549,885 - 0.6
549,894 + 2.2
549,957 - 1.8
550,012 + 0.6
550,020 - 0.3
550,033 - 2.1
550,033 + 0.6
550,034 + -0.9
550,290 - 1.1
550,316 - 0.5
550,323 - 0.5
550,324 - -0.2
550,440 - 10959 mRNA_2591 0.14 0.4
550,470 + 10959 mRNA_2591 0.16 0.0
550,614 - 10959 mRNA_2591 0.24 -0.4