Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2574

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2573: 10941 - K03848 ALG6 alpha-1,3-glucosyltransferase, at 474232 to 477732 10941 mRNA_2574: 10942 - K10158 B3GAT3 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3, at 477863 to 478879 10942 mRNA_2575: 10943 - KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2, at 479011 to 480812 10943

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
476,925 + 10941 mRNA_2573 0.77 0.1
477,467 - 0.6
477,479 + 0.3
477,770 - 0.4
477,793 + 1.1
477,795 + 0.8
477,795 + 0.4
477,810 - 0.1
477,881 - 1.9
477,939 + -0.5
477,966 - 10942 mRNA_2574 0.10 -0.5
478,008 + 10942 mRNA_2574 0.14 -0.2
478,075 - 10942 mRNA_2574 0.21 1.4
478,231 + 10942 mRNA_2574 0.36 -0.1
478,239 - 10942 mRNA_2574 0.37 1.2
478,243 + 10942 mRNA_2574 0.37 1.5
478,243 - 10942 mRNA_2574 0.37 0.6
478,360 + 10942 mRNA_2574 0.49 1.0
478,396 + 10942 mRNA_2574 0.52 0.6
478,809 - 1.8
478,826 - 1.5
478,828 + -0.4
479,074 - -0.9
479,107 + 0.6
479,116 - -0.2
479,120 - -0.4
479,121 - -0.1
479,238 + 10943 mRNA_2575 0.13 -0.6
479,254 - 10943 mRNA_2575 0.13 0.8
479,367 - 10943 mRNA_2575 0.20 1.9
479,544 + 10943 mRNA_2575 0.30 1.1
479,618 - 10943 mRNA_2575 0.34 1.7