Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2563

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2562: 10930 - Hypothetical Protein, at 452219 to 453821 10930 mRNA_2563: 10931 - Interpro F-box-like, at 454095 to 455181 10931 mRNA_2564: 10932 - SUPERFAMILY--SSF52058, at 455625 to 456615 10932

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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453,102 - 10930 mRNA_2562 0.55 -1.3
453,267 - 10930 mRNA_2562 0.65 0.6
453,277 + 10930 mRNA_2562 0.66 0.4
453,284 - 10930 mRNA_2562 0.66 -1.1
453,453 - 10930 mRNA_2562 0.77 0.2
453,456 + 10930 mRNA_2562 0.77 0.8
453,579 + 10930 mRNA_2562 0.85 -0.6
453,724 + -1.1
453,745 + -0.8
453,886 - 1.2
454,141 + 0.4
454,170 + 2.0
454,174 + -0.0
454,287 + 10931 mRNA_2563 0.18 0.1
454,432 - 10931 mRNA_2563 0.31 0.8
454,477 - 10931 mRNA_2563 0.35 0.2
454,585 + 10931 mRNA_2563 0.45 -0.6
454,635 - 10931 mRNA_2563 0.50 0.3
455,084 + 2.0
455,318 - -0.2
455,493 - -0.6
455,518 + -0.6
455,622 - 0.5
455,780 + 10932 mRNA_2564 0.16 0.3
456,085 - 10932 mRNA_2564 0.46 0.5