Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2511

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2510: 10878 - K09272 SSRP1 structure-specific recognition protein 1, at 322447 to 324875 10878 mRNA_2511: 10879 - Hypothetical Protein, at 325474 to 325902 10879 mRNA_2512: 10880 - Hypothetical Protein, at 326748 to 327391 10880

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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325,169 + 0.8
325,175 + 1.0
325,764 + 10879 mRNA_2511 0.68 -1.2
326,175 - -0.2
326,181 + -1.1
326,201 + 0.2
326,202 + 0.3
326,206 + 1.5
326,228 + 1.1
326,229 + 0.2
326,241 - 1.6
326,277 - 0.3
326,321 + 0.6
326,323 - 0.7
326,332 + -0.0
326,338 - -0.4
326,338 + 0.5
326,350 + 0.0
326,350 - -0.7
326,380 + -0.2
326,419 + 0.3
326,434 + 0.3
326,453 + 0.4
326,454 + -0.4
326,499 - 0.1
326,524 + 1.0
326,525 - 0.8
326,619 + 0.4
326,621 - 0.1
326,621 - 0.4
326,624 - 0.0
326,630 + 0.1
326,644 - 0.7
326,647 - 1.2
326,656 - 0.3
326,659 + -0.0
326,767 + -0.6
326,847 + 10880 mRNA_2512 0.15 -0.3