Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2499

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2499: 10867 - BLAST secreted protein [Moniliophthora roreri MCA 2997], at 297402 to 298448 10867 mRNA_2500: 10868 - Hypothetical Protein, at 299018 to 301561 10868

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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296,509 - -0.2
296,512 + -0.1
296,517 + 0.7
296,526 - -0.4
296,529 - 0.7
296,539 - -1.1
296,624 - 0.7
296,639 - 0.6
296,719 - 1.5
296,781 - -0.5
296,792 - 0.5
296,794 + -0.0
296,811 + -0.7
296,816 - 0.5
296,821 - 0.4
296,824 + -0.0
296,932 + -0.2
296,945 - 1.4
296,945 - 0.5
296,948 + 0.8
296,948 - 0.9
296,949 + 1.5
296,952 - 0.5
296,953 + 0.2
296,955 - -0.2
296,957 + -0.4
296,960 + -1.5
296,967 - 0.4
296,973 - 0.5
296,980 - -0.3
296,986 + 1.7
296,993 - 1.0
296,997 + 0.7
297,001 + 0.9
297,024 + 0.3
297,054 - -1.1
297,088 - 0.6
297,097 - 1.1
297,128 + 0.3
297,139 + 0.9
297,146 - 0.3
297,154 + 0.4
297,271 - 0.4
297,281 - -1.6
297,289 - 0.5
297,290 + 0.1
297,290 + -0.0
297,299 + -0.1
297,337 - 0.6
297,418 - 1.4
297,441 + -0.2
297,464 + 0.1
297,570 + 10867 mRNA_2499 0.16 0.5
297,579 - 10867 mRNA_2499 0.17 -0.8
297,741 + 10867 mRNA_2499 0.32 0.0
297,751 - 10867 mRNA_2499 0.33 -0.5
298,505 + 0.0
298,633 + 1.2
298,760 + -0.7
298,761 + 0.1
298,802 + 1.0
298,802 + 0.8
298,932 + 0.7
298,942 + 0.1
298,947 + 0.7
299,263 + 0.7