Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2482

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2482: 10850 - KOG0712 Molecular chaperone (DnaJ superfamily), at 252498 to 254224 10850 mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254371 to 257459 10851

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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251,608 - 1.0
251,918 + 0.9
251,944 - -0.7
252,056 + -0.2
252,057 + 0.3
252,092 - 1.8
252,161 - 0.3
252,187 + 0.1
252,196 - -0.5
252,232 + 0.7
252,258 - 0.1
252,265 - 0.4
252,372 + -0.8
252,372 - -0.2
252,373 - 0.3
252,387 + 0.5
252,826 - 10850 mRNA_2482 0.19 0.6
253,230 - 10850 mRNA_2482 0.42 1.6
253,402 - 10850 mRNA_2482 0.52 1.0
253,412 + 10850 mRNA_2482 0.53 -0.1
253,430 + 10850 mRNA_2482 0.54 -1.0
253,557 - 10850 mRNA_2482 0.61 -0.0
253,684 + 10850 mRNA_2482 0.69 1.8
253,859 - 10850 mRNA_2482 0.79 1.7
253,981 - 10850 mRNA_2482 0.86 1.2
253,986 + 10850 mRNA_2482 0.86 0.1
253,986 + 10850 mRNA_2482 0.86 0.2
253,994 - 10850 mRNA_2482 0.87 -0.0
254,036 + 10850 mRNA_2482 0.89 0.4
254,147 - 0.3
254,149 - -0.8
254,303 + 1.4
254,307 + 1.0
254,318 - 0.8
254,458 - 0.2
254,715 - 10851 mRNA_2483 0.11 1.2
254,721 - 10851 mRNA_2483 0.11 -0.1
254,742 - 10851 mRNA_2483 0.12 0.4
254,751 + 10851 mRNA_2483 0.12 -1.1
254,871 + 10851 mRNA_2483 0.16 0.1
255,057 - 10851 mRNA_2483 0.22 0.5
255,058 + 10851 mRNA_2483 0.22 0.2