Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2416

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2415: 10783 - Hypothetical Protein, at 70099 to 71162 10783 mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784 mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74792 to 76110 10785

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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71,069 + -0.4
71,100 - 0.1
71,184 + 0.1
71,203 - 0.4
71,210 - 0.4
71,351 - 0.4
71,364 - 0.8
71,371 - 0.6
71,405 + 1.0
71,515 - 0.1
71,528 + 0.7
71,538 + -0.4
71,541 + -0.1
71,542 + 0.1
71,663 - 0.3
71,667 + 0.6
71,806 - 1.1
71,812 - 0.4
71,827 - 1.3
71,840 - 0.7
71,840 - -0.0
71,841 + 1.1
71,860 - 0.3
72,027 + 1.0
72,108 + 0.0
72,143 - 1.8
72,158 - 1.9
72,181 + 0.0
72,226 + -0.9
72,333 + 10784 mRNA_2416 0.11 0.3
72,735 + 10784 mRNA_2416 0.26 -0.0
72,858 + 10784 mRNA_2416 0.31 -1.7
72,868 + 10784 mRNA_2416 0.31 -0.3
73,189 + 10784 mRNA_2416 0.44 -0.9
73,464 - 10784 mRNA_2416 0.55 0.2
73,724 + 10784 mRNA_2416 0.65 -0.5
74,016 + 10784 mRNA_2416 0.76 0.3
74,257 + 10784 mRNA_2416 0.85 0.2
74,478 + 0.5
74,481 + 0.5
74,542 - 0.4
74,605 + -0.2
74,777 - 1.0
75,237 + 10785 mRNA_2417 0.34 1.5
75,400 + 10785 mRNA_2417 0.46 -0.0
75,428 + 10785 mRNA_2417 0.48 -0.2