Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2371

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2370: 10738 - K01410 MIPEP mitochondrial intermediate peptidase, at 732423 to 734982 10738 mRNA_2371: 10739 - BLAST Tubulin beta-2 chain [Grifola frondosa], at 735003 to 736788 10739

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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735,011 + 0.2
735,457 + 10739 mRNA_2371 0.25 1.3
736,053 - 10739 mRNA_2371 0.59 1.2
736,324 + 10739 mRNA_2371 0.74 0.3
736,329 + 10739 mRNA_2371 0.74 1.1
736,786 - 0.6
736,794 + 0.2
736,888 - 0.5
736,889 + 0.0
736,899 - -0.2
736,987 - -0.4
737,029 + 0.4
737,042 - 0.6
737,053 + 0.5
737,054 - 0.5
737,065 - 0.1
737,065 + -0.4
737,122 - -0.9
737,171 + -0.4
737,176 - 0.9
737,180 - 0.0
737,181 + 1.5
737,184 + -0.3
737,198 + 1.4
737,246 - 0.7
737,258 - 1.4
737,267 - 0.0
737,310 + 0.5
737,312 + 1.1
737,314 - -0.6
737,383 - 0.0
737,416 + -0.1
737,473 - -0.5
737,660 - 0.0
737,666 - 0.3
737,674 + 1.6
737,676 + -0.7
737,686 + 0.3