Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2284

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2283: 10651 - KOG1674 Cyclin, at 524604 to 524992 10651 mRNA_2284: 10652 - Hypothetical Protein, at 525584 to 526132 10652 mRNA_2285: 10653 - SUPERFAMILY--SSF53300, at 526661 to 528036 10653

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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524,722 + 10651 mRNA_2283 0.30 0.2
524,847 + 10651 mRNA_2283 0.62 -0.2
524,853 + 10651 mRNA_2283 0.64 0.9
525,090 + 0.4
525,140 + 0.7
525,271 - 0.3
525,410 + 2.2
525,575 + 0.5
525,576 - 0.3
525,589 + 1.3
525,652 - 10652 mRNA_2284 0.12 0.9
525,665 - 10652 mRNA_2284 0.15 0.7
525,689 + 10652 mRNA_2284 0.19 -0.4
525,691 + 10652 mRNA_2284 0.19 2.2
525,713 - 10652 mRNA_2284 0.23 1.0
525,717 + 10652 mRNA_2284 0.24 0.9
525,719 + 10652 mRNA_2284 0.25 0.1
525,722 + 10652 mRNA_2284 0.25 0.8
525,727 + 10652 mRNA_2284 0.26 0.3
525,732 + 10652 mRNA_2284 0.27 -0.5
525,747 + 10652 mRNA_2284 0.30 0.9
525,751 + 10652 mRNA_2284 0.30 -0.0
525,753 - 10652 mRNA_2284 0.31 0.1
525,754 - 10652 mRNA_2284 0.31 0.2
525,766 - 10652 mRNA_2284 0.33 0.7
525,767 + 10652 mRNA_2284 0.33 1.3
525,773 + 10652 mRNA_2284 0.34 -0.9
525,797 + 10652 mRNA_2284 0.39 -0.6
525,806 - 10652 mRNA_2284 0.40 0.5
525,833 + 10652 mRNA_2284 0.45 0.5
525,833 + 10652 mRNA_2284 0.45 0.1
525,847 + 10652 mRNA_2284 0.48 1.1
525,855 + 10652 mRNA_2284 0.49 -0.1
525,857 - 10652 mRNA_2284 0.50 0.4
525,862 + 10652 mRNA_2284 0.51 1.0
525,864 + 10652 mRNA_2284 0.51 -0.9
525,871 - 10652 mRNA_2284 0.52 -0.6
525,876 + 10652 mRNA_2284 0.53 -1.0
525,878 - 10652 mRNA_2284 0.54 -0.1
525,971 - 10652 mRNA_2284 0.70 -0.2
525,977 - 10652 mRNA_2284 0.72 -0.3
525,987 + 10652 mRNA_2284 0.73 0.9
525,996 - 10652 mRNA_2284 0.75 -0.4
526,002 - 10652 mRNA_2284 0.76 0.1
526,011 - 10652 mRNA_2284 0.78 0.1
526,020 + 10652 mRNA_2284 0.79 0.5
526,025 - 10652 mRNA_2284 0.80 -0.4
526,027 - 10652 mRNA_2284 0.81 2.7
526,040 + 10652 mRNA_2284 0.83 -0.2
526,043 - 10652 mRNA_2284 0.84 0.6
526,045 + 10652 mRNA_2284 0.84 -0.7
526,047 + 10652 mRNA_2284 0.84 0.8
526,052 + 10652 mRNA_2284 0.85 0.5
526,053 + 10652 mRNA_2284 0.85 -0.1
526,056 + 10652 mRNA_2284 0.86 -0.5
526,060 + 10652 mRNA_2284 0.87 0.6
526,060 + 10652 mRNA_2284 0.87 0.7
526,064 + 10652 mRNA_2284 0.87 0.5
526,065 - 10652 mRNA_2284 0.88 0.3
526,066 + 10652 mRNA_2284 0.88 -0.9
526,068 + 10652 mRNA_2284 0.88 0.8
526,070 + 10652 mRNA_2284 0.89 0.3
526,078 - 1.9
526,082 + 0.9
526,082 - 2.8
526,085 - -0.7
526,087 + 0.2
526,106 + 0.2
526,106 + 0.1
526,116 + 0.3
526,116 - 0.7
526,117 - 0.6
526,125 - 0.8
526,129 + 0.0
526,132 - 0.1
526,138 - 0.2
526,149 + -0.7
526,164 + 0.0
526,174 - 1.3
526,181 - 0.7
526,184 + -0.5
526,186 + 0.9
526,192 + 0.3
526,193 + 0.5
526,195 - -0.3
526,198 + 0.5
526,199 - -0.3
526,204 - 0.9
526,210 + 0.8
526,214 - -0.2
526,234 + 0.5
526,254 - 0.1
526,275 - -1.0
526,279 - 0.3
526,289 - 1.0
526,296 + 1.1
526,297 - 1.0
526,298 + 0.2
526,303 + 0.8
526,307 + 0.6
526,309 - 0.0
526,324 - 1.1
526,331 + 0.5
526,333 + 0.7
526,334 + -1.1
526,344 - -0.2
526,345 - 0.5
526,453 + 0.6
526,460 + -0.5
526,500 + -0.2
526,526 + 1.5
526,655 - 0.3
526,672 + 0.6
526,679 + 0.9
526,804 + 10653 mRNA_2285 0.10 0.3
526,925 + 10653 mRNA_2285 0.19 0.6